RNA–Protein interactions for RNA: ENST00000295461.9

NIPAL1-201, Transcript of NIPA like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL1, Length 5,300 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-201ENST00000295461 ABCB4P21439 1286 aa12.83□□□□□ -0.35
NIPAL1-201ENST00000295461 EARS2Q5JPH6 523 aaKnown RBP12.83□□□□□ -0.35
NIPAL1-201ENST00000295461 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.35
NIPAL1-201ENST00000295461 CHP1Q99653 195 aa12.83□□□□□ -0.35
NIPAL1-201ENST00000295461 MYO1AQ9UBC5 1043 aa12.83□□□□□ -0.35
NIPAL1-201ENST00000295461 TDP2O95551 362 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 CC2D1AQ6P1N0 951 aaPredicted RBP12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 RIOK1Q9BRS2 568 aaKnown RBP12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 ADD3Q9UEY8 706 aaKnown RBP12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 FAN1Q9Y2M0 1017 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 MRFAP1Q9Y605 127 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 CCDC169A6NNP5 214 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 KCNK3O14649 394 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 MYL1P05976 194 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 EHHADHQ08426 723 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 SEPT7Q16181 437 aaKnown RBP12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 GPATCH4Q5T3I0 446 aaKnown RBP12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 FBXL16Q8N461 479 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 TAOK3Q9H2K8 898 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 CCDC151A5D8V7 595 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 GNA14O95837 355 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 NR2F2P24468 414 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 TERF2Q15554 542 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 STK17AQ9UEE5 414 aa12.83□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 EBAG9O00559 213 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 GAS7O60861 476 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 TADA3O75528 432 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 ABCB5Q2M3G0 1257 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L6PQ6QN14 398 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 CCDC25Q86WR0 208 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 DDX12PQ92771 950 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 RPGRIP1Q96KN7 1286 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 PPP4R3AQ6IN85 833 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 PEX26Q7Z412 305 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 CLRN2A0PK11 232 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 CLIC2O15247 247 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 CETN2P41208 172 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 MICALCLQ6ZW33 695 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 TXNRD3Q86VQ6 643 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 SLFN12Q8IYM2 578 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 IQCDQ96DY2 449 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 FLOT1O75955 427 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 SEC23AQ15436 765 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 RETREG2Q8NC44 543 aa12.82□□□□□ -0.36
NIPAL1-201ENST00000295461 PNMA6FA0A0J9YX94 578 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 USP17L10C9JJH3 530 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 HOXA13P31271 388 aaPredicted RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 KIF11P52732 1056 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 TRIM10Q9UDY6 481 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 ANAPC4Q9UJX5 808 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 FTCDO95954 541 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 PLA2G4BP0C869 781 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 PDE6BP35913 854 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 FKBP3Q00688 224 aaKnown RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 SELENOSQ9BQE4 189 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 AMNQ9BXJ7 453 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 NUCKS1Q9H1E3 243 aaKnown RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 SWAP70Q9UH65 585 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 PCDHA13Q9Y5I0 950 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 GOLGA6L7A0A1B0GV03 622 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 TBC1D10BQ4KMP7 808 aaPredicted RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 TTC19Q6DKK2 380 aaPredicted RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 REXO1L1PQ8IX06 675 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 E9PMD0 336 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 AKR1B1P15121 316 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 TCP1P17987 556 aaKnown RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 SLC7A5Q01650 507 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 ADAT2Q7Z6V5 191 aaKnown RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 DCCP43146 1447 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 PKN1Q16512 942 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 CDC37Q16543 378 aaPredicted RBP12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 RASAL2Q9UJF2 1139 aa12.81□□□□□ -0.36
NIPAL1-201ENST00000295461 KRT5P13647 590 aa12.8□□□□□ -0.36
NIPAL1-201ENST00000295461 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
NIPAL1-201ENST00000295461 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
NIPAL1-201ENST00000295461 LRRN4CLQ8ND94 238 aa12.8□□□□□ -0.36
NIPAL1-201ENST00000295461 FAM204AQ9H8W3 233 aa12.8□□□□□ -0.36
NIPAL1-201ENST00000295461 MLXIPQ9HAP2 919 aa12.8□□□□□ -0.36
NIPAL1-201ENST00000295461 CTTNBP2NLQ9P2B4 639 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms