RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SEZ6LQ9BYH1 1024 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 MAF1Q9H063 256 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 ALDH8A1Q9H2A2 487 aaPredicted RBP29.44■■■□□ 2.3
U2AF1-201ENST00000291552 HIPK3Q9H422 1215 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 SENP2Q9HC62 589 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 POLR3EQ9NVU0 708 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 MAD2L2Q9UI95 211 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 MYH7BA7E2Y1 1941 aa29.43■■■□□ 2.3
U2AF1-201ENST00000291552 DHX16O60231 1041 aaKnown RBP29.43■■■□□ 2.3
U2AF1-201ENST00000291552 PPP1R11O60927 126 aaPredicted RBP29.43■■■□□ 2.3
U2AF1-201ENST00000291552 MYL3P08590 195 aa29.43■■■□□ 2.3
U2AF1-201ENST00000291552 CPT1AP50416 773 aa29.43■■■□□ 2.3
U2AF1-201ENST00000291552 ZNF365Q70YC5 407 aa29.43■■■□□ 2.3
U2AF1-201ENST00000291552 RUFY2Q8WXA3 655 aa29.43■■■□□ 2.3
U2AF1-201ENST00000291552 MTMR8Q96EF0 704 aa29.43■■■□□ 2.3
U2AF1-201ENST00000291552 MPHOSPH6Q99547 160 aaKnown RBP29.43■■■□□ 2.3
U2AF1-201ENST00000291552 WNT8AQ9H1J5 351 aa29.43■■■□□ 2.3
U2AF1-201ENST00000291552 TANC1Q9C0D5 1861 aa29.42■■■□□ 2.3
U2AF1-201ENST00000291552 NKRFO15226 690 aaKnown RBP eCLIP29.42■■■□□ 2.3
U2AF1-201ENST00000291552 CCDC62Q6P9F0 684 aa29.42■■■□□ 2.3
U2AF1-201ENST00000291552 IL23AQ9NPF7 189 aa29.42■■■□□ 2.3
U2AF1-201ENST00000291552 PALM3A6NDB9 673 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-201ENST00000291552 A6NJR5 290 aa29.41■■■□□ 2.3
U2AF1-201ENST00000291552 KLRF2D3W0D1 207 aa29.41■■■□□ 2.3
U2AF1-201ENST00000291552 TXNP10599 105 aaKnown RBP29.41■■■□□ 2.3
U2AF1-201ENST00000291552 PSRC1Q6PGN9 363 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-201ENST00000291552 PPP1R13LQ8WUF5 828 aa29.41■■■□□ 2.3
U2AF1-201ENST00000291552 VWCEQ96DN2 955 aa29.41■■■□□ 2.3
U2AF1-201ENST00000291552 MTG1Q9BT17 334 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-201ENST00000291552 TRMT13Q9NUP7 481 aaKnown RBP29.41■■■□□ 2.3
U2AF1-201ENST00000291552 MRPL11Q9Y3B7 192 aaKnown RBP29.41■■■□□ 2.3
U2AF1-201ENST00000291552 U3KPZ7 1027 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-201ENST00000291552 TMEM265A0A087WTH1 108 aa29.4■■■□□ 2.3
U2AF1-201ENST00000291552 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.4■■■□□ 2.3
U2AF1-201ENST00000291552 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.4■■■□□ 2.3
U2AF1-201ENST00000291552 DNAJB2P25686 324 aa29.4■■■□□ 2.3
U2AF1-201ENST00000291552 CCL23P55773 120 aa29.4■■■□□ 2.3
U2AF1-201ENST00000291552 MYLIPQ8WY64 445 aa29.4■■■□□ 2.3
U2AF1-201ENST00000291552 GRXCR1A8MXD5 290 aa29.39■■■□□ 2.3
U2AF1-201ENST00000291552 E7EWF7 191 aa29.39■■■□□ 2.3
U2AF1-201ENST00000291552 ANTXR2P58335 489 aa29.39■■■□□ 2.3
U2AF1-201ENST00000291552 GHRHRQ02643 423 aa29.39■■■□□ 2.3
U2AF1-201ENST00000291552 TTLL4Q14679 1199 aa29.39■■■□□ 2.3
U2AF1-201ENST00000291552 GRM4Q14833 912 aa29.39■■■□□ 2.3
U2AF1-201ENST00000291552 MCF2L2Q86YR7 1114 aa29.39■■■□□ 2.3
U2AF1-201ENST00000291552 NSUN6Q8TEA1 469 aaKnown RBP29.39■■■□□ 2.3
U2AF1-201ENST00000291552 TRIP12Q14669 1992 aaPredicted RBP29.39■■■□□ 2.29
U2AF1-201ENST00000291552 B4DLN1 442 aa29.38■■■□□ 2.29
U2AF1-201ENST00000291552 HSD17B4P51659 736 aa29.38■■■□□ 2.29
U2AF1-201ENST00000291552 MRPL12P52815 198 aaKnown RBP29.38■■■□□ 2.29
U2AF1-201ENST00000291552 TRDNQ13061 729 aa29.38■■■□□ 2.29
U2AF1-201ENST00000291552 RMDN3Q96TC7 470 aa29.38■■■□□ 2.29
U2AF1-201ENST00000291552 AMNQ9BXJ7 453 aa29.38■■■□□ 2.29
U2AF1-201ENST00000291552 CXXC1Q9P0U4 656 aaPredicted RBP29.38■■■□□ 2.29
U2AF1-201ENST00000291552 IFIT3O14879 490 aaKnown RBP29.37■■■□□ 2.29
U2AF1-201ENST00000291552 CYP2C9P11712 490 aa29.37■■■□□ 2.29
U2AF1-201ENST00000291552 EIF2AK2P19525 551 aaKnown RBP29.37■■■□□ 2.29
U2AF1-201ENST00000291552 NBPF20Q3BBV1 942 aa29.37■■■□□ 2.29
U2AF1-201ENST00000291552 SEPT14Q6ZU15 432 aa29.37■■■□□ 2.29
U2AF1-201ENST00000291552 CHST3Q7LGC8 479 aa29.37■■■□□ 2.29
U2AF1-201ENST00000291552 HERVK_113Q902F9 699 aa29.37■■■□□ 2.29
U2AF1-201ENST00000291552 TET1Q8NFU7 2136 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 ZBTB5O15062 677 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 CFBP00751 764 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 PBX2P40425 430 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 ARHGAP1Q07960 439 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 LY6KQ17RY6 165 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 MB21D2Q8IYB1 491 aaPredicted RBP29.36■■■□□ 2.29
U2AF1-201ENST00000291552 MAP4K1Q92918 833 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 SCLYQ96I15 445 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 IWS1Q96ST2 819 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 PXMP2Q9NR77 195 aa29.36■■■□□ 2.29
U2AF1-201ENST00000291552 CHD7Q9P2D1 2997 aa29.35■■■□□ 2.29
U2AF1-201ENST00000291552 CYTH3O43739 400 aa29.35■■■□□ 2.29
U2AF1-201ENST00000291552 TROAPQ12815 778 aa29.35■■■□□ 2.29
U2AF1-201ENST00000291552 STXBP2Q15833 593 aa29.35■■■□□ 2.29
U2AF1-201ENST00000291552 BRDTQ58F21 947 aaPredicted RBP29.35■■■□□ 2.29
U2AF1-201ENST00000291552 AFG1LQ8WV93 481 aa29.35■■■□□ 2.29
U2AF1-201ENST00000291552 PBX4Q9BYU1 374 aa29.35■■■□□ 2.29
U2AF1-201ENST00000291552 GRIN2CQ14957 1233 aa29.34■■■□□ 2.29
U2AF1-201ENST00000291552 RALYLQ86SE5 291 aaKnown RBP29.34■■■□□ 2.29
U2AF1-201ENST00000291552 NCOA7Q8NI08 942 aa29.34■■■□□ 2.29
U2AF1-201ENST00000291552 TIFAQ96CG3 184 aa29.34■■■□□ 2.29
U2AF1-201ENST00000291552 PIGSQ96S52 555 aa29.34■■■□□ 2.29
U2AF1-201ENST00000291552 RIOX1Q9H6W3 641 aa29.34■■■□□ 2.29
U2AF1-201ENST00000291552 GPHNQ9NQX3 736 aaPredicted RBP29.34■■■□□ 2.29
U2AF1-201ENST00000291552 PCDHA1Q9Y5I3 950 aa29.34■■■□□ 2.29
U2AF1-201ENST00000291552 RBM8AQ9Y5S9 174 aaKnown RBP29.34■■■□□ 2.29
U2AF1-201ENST00000291552 DLL1O00548 723 aa29.33■■■□□ 2.29
U2AF1-201ENST00000291552 NR3C2P08235 984 aa29.33■■■□□ 2.29
U2AF1-201ENST00000291552 MMP3P08254 477 aa29.33■■■□□ 2.29
U2AF1-201ENST00000291552 COL9A3Q14050 684 aaPredicted RBP29.33■■■□□ 2.29
U2AF1-201ENST00000291552 WTAPQ15007 396 aa29.33■■■□□ 2.29
U2AF1-201ENST00000291552 ARHGEF16Q5VV41 709 aa29.33■■■□□ 2.29
U2AF1-201ENST00000291552 NFRKBQ6P4R8 1299 aa29.33■■■□□ 2.29
U2AF1-201ENST00000291552 HOMER1Q86YM7 354 aa29.33■■■□□ 2.29
U2AF1-201ENST00000291552 KPNA6O60684 536 aa29.32■■■□□ 2.28
U2AF1-201ENST00000291552 GH1P01241 217 aa29.32■■■□□ 2.28
U2AF1-201ENST00000291552 FGBP02675 491 aa29.32■■■□□ 2.28
U2AF1-201ENST00000291552 FAM47CQ5HY64 1035 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms