RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PSMA7O14818 248 aa21.62■■□□□ 1.05
BRAF-201ENST00000288602 FXR1P51114 621 aaKnown RBP eCLIP21.62■■□□□ 1.05
BRAF-201ENST00000288602 DLGAP5Q15398 846 aa21.62■■□□□ 1.05
BRAF-201ENST00000288602 LARP4BQ92615 738 aaKnown RBP21.62■■□□□ 1.05
BRAF-201ENST00000288602 MAGEF1Q9HAY2 307 aa21.62■■□□□ 1.05
BRAF-201ENST00000288602 ZNF70Q9UC06 446 aaPredicted RBP21.62■■□□□ 1.05
BRAF-201ENST00000288602 RNF225M0QZC1 329 aaPredicted RBP21.61■■□□□ 1.05
BRAF-201ENST00000288602 PES1O00541 588 aaKnown RBP21.61■■□□□ 1.05
BRAF-201ENST00000288602 MEIS2O14770 477 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 STIM1Q13586 685 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 KIAA1755Q5JYT7 1200 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 TMOD2Q9NZR1 351 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 PDIA5Q14554 519 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 KRT79Q5XKE5 535 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 MIGA2Q7L4E1 593 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 RTKN2Q8IZC4 609 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 GMCL1P1Q8NEA9 526 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 ACER1Q8TDN7 264 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 ANO3Q9BYT9 981 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 RAB34Q9BZG1 259 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 PCDHA12Q9UN75 941 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 SMCHD1A6NHR9 2005 aa21.61■■□□□ 1.05
BRAF-201ENST00000288602 VIL1P09327 827 aaKnown RBP21.6■■□□□ 1.05
BRAF-201ENST00000288602 BMP3P12645 472 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 AMPD3Q01432 767 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 UBXN1Q04323 297 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 TTI2Q6NXR4 508 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 OGFOD1Q8N543 542 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 KIAA0895Q8NCT3 520 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.6■■□□□ 1.05
BRAF-201ENST00000288602 DNAI1Q9UI46 699 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 V9GYY5 206 aaPredicted RBP21.6■■□□□ 1.05
BRAF-201ENST00000288602 FANCGO15287 622 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 SYDE2Q5VT97 1194 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 ANKRD40Q6AI12 368 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 ANKRD20A12PQ8NF67 263 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 GMCL1Q96IK5 515 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 GMLQ99445 158 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 DUSP9Q99956 384 aaKnown RBP21.6■■□□□ 1.05
BRAF-201ENST00000288602 AMNQ9BXJ7 453 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 TMEM39BQ9GZU3 492 aa21.6■■□□□ 1.05
BRAF-201ENST00000288602 ARFGEF1Q9Y6D6 1849 aa21.59■■□□□ 1.05
BRAF-201ENST00000288602 MFAP3LO75121 409 aa21.59■■□□□ 1.05
BRAF-201ENST00000288602 SPAG1Q07617 926 aa21.59■■□□□ 1.05
BRAF-201ENST00000288602 TRIM65Q6PJ69 517 aa21.59■■□□□ 1.05
BRAF-201ENST00000288602 FBXO11Q86XK2 927 aa21.59■■□□□ 1.05
BRAF-201ENST00000288602 PSMD1Q99460 953 aa21.59■■□□□ 1.05
BRAF-201ENST00000288602 NKRFO15226 690 aaKnown RBP eCLIP21.58■■□□□ 1.051e-8■■□□□ 11.7
BRAF-201ENST00000288602 HOXA13P31271 388 aaPredicted RBP21.58■■□□□ 1.05
BRAF-201ENST00000288602 ZYXQ15942 572 aaKnown RBP21.58■■□□□ 1.05
BRAF-201ENST00000288602 SAMD1Q6SPF0 538 aaPredicted RBP21.58■■□□□ 1.05
BRAF-201ENST00000288602 CSGALNACT2Q8N6G5 542 aa21.58■■□□□ 1.05
BRAF-201ENST00000288602 RAD54LQ92698 747 aa21.58■■□□□ 1.05
BRAF-201ENST00000288602 ZNF215Q9UL58 517 aaPredicted RBP21.58■■□□□ 1.05
BRAF-201ENST00000288602 KIF2AO00139 706 aaPredicted RBP21.58■■□□□ 1.05
BRAF-201ENST00000288602 IDEP14735 1019 aa21.58■■□□□ 1.05
BRAF-201ENST00000288602 RAD9BQ6WBX8 426 aa21.58■■□□□ 1.05
BRAF-201ENST00000288602 CCDC47Q96A33 483 aaKnown RBP21.58■■□□□ 1.05
BRAF-201ENST00000288602 PANX2Q96RD6 677 aa21.58■■□□□ 1.05
BRAF-201ENST00000288602 CNTNAP1P78357 1384 aa21.58■■□□□ 1.04
BRAF-201ENST00000288602 A0A0U1RQJ8 604 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 STAT3P40763 770 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 ATRIPQ8WXE1 791 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 P2RX5Q93086 422 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 PDCL3Q9H2J4 239 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 HDAC9Q9UKV0 1011 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 SHTN1A0MZ66 631 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 CCP110O43303 1012 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 ZSCAN12O43309 604 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 ETF1P62495 437 aaKnown RBP21.57■■□□□ 1.04
BRAF-201ENST00000288602 NCBP1Q09161 790 aaKnown RBP21.57■■□□□ 1.04
BRAF-201ENST00000288602 SF3B2Q13435 895 aaKnown RBP21.57■■□□□ 1.04
BRAF-201ENST00000288602 DHTKD1Q96HY7 919 aaPredicted RBP21.57■■□□□ 1.04
BRAF-201ENST00000288602 STK17AQ9UEE5 414 aa21.57■■□□□ 1.04
BRAF-201ENST00000288602 CCDC84Q86UT8 332 aaPredicted RBP21.56■■□□□ 1.04
BRAF-201ENST00000288602 FCHSD1Q86WN1 690 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 GLIS3Q8NEA6 775 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 FAM151AQ8WW52 585 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 DDX12PQ92771 950 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 HERC5Q9UII4 1024 aaKnown RBP21.56■■□□□ 1.04
BRAF-201ENST00000288602 PRR12Q9ULL5 1215 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 SSBP05455 408 aaKnown RBP eCLIP21.56■■□□□ 1.04
BRAF-201ENST00000288602 GCFC2P16383 781 aaKnown RBP21.56■■□□□ 1.04
BRAF-201ENST00000288602 CCNE1P24864 410 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 PRR16Q569H4 304 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 SEMA6BQ9H3T3 888 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 THAP9Q9H5L6 903 aa21.56■■□□□ 1.04
BRAF-201ENST00000288602 OPLAHO14841 1288 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 BAG6P46379 1132 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 ARHGAP4P98171 946 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 TMEM119Q4V9L6 283 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 FAM83BQ5T0W9 1011 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 CNNM4Q6P4Q7 775 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 ITIH6Q6UXX5 1313 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 PSME4Q14997 1843 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 B4DLN1 442 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 E9PMD0 336 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 LRRC41Q15345 812 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 SPDYE2Q495Y8 402 aa21.55■■□□□ 1.04
BRAF-201ENST00000288602 MRPL44Q9H9J2 332 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms