RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 RICTORQ6R327 1708 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 CTIFO43310 598 aaKnown RBP13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 HIP1RO75146 1068 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 C2orf54Q08AI8 447 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 PTPAQ15257 358 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 LRRN4CLQ8ND94 238 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 MCUR1Q96AQ8 359 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
SLC6A1-201ENST00000287766 FXR1P51114 621 aaKnown RBP eCLIP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 PDE1CQ14123 709 aaPredicted RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 SLC24A3Q9HC58 644 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 ADAM21Q9UKJ8 722 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 SLC7A5Q01650 507 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 SEPT14Q6ZU15 432 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 GSPT2Q8IYD1 628 aaKnown RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 CHP1Q99653 195 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 BRIP1Q9BX63 1249 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 TFR2Q9UP52 801 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 DESP17661 470 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 GBP1P32455 592 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 CC2D1AQ6P1N0 951 aaPredicted RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 SPICE1Q8N0Z3 855 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 N4BP2L2Q92802 583 aaPredicted RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 EXOC4Q96A65 974 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 PLA2G12BQ9BX93 195 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 ABHD10Q9NUJ1 306 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 DDX25Q9UHL0 483 aaKnown RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 TTC26A0AVF1 554 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 WTIPA6NIX2 430 aaPredicted RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 MEIS1O00470 390 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 ABCB4P21439 1286 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 ARHGAP44Q17R89 818 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 FAM26FQ5R3K3 315 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 RASIP1Q5U651 963 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 STXBP4Q6ZWJ1 553 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 RNF10Q8N5U6 811 aaKnown RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 TC2NQ8N9U0 490 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 LARP4BQ92615 738 aaKnown RBP13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 KANSL2Q9H9L4 492 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 PANK4Q9NVE7 773 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 ATP6V0A2Q9Y487 856 aa13.8□□□□□ -0.2
SLC6A1-201ENST00000287766 POTEMA6NI47 508 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 MOCS3O95396 460 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 ZSCAN20P17040 1043 aaPredicted RBP13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 SNAP25P60880 206 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 EHHADHQ08426 723 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 TPH2Q8IWU9 490 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 BICD1Q96G01 975 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 RNF40O75150 1001 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 PPP1R2P41236 205 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 TOB1P50616 345 aaPredicted RBP13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 RAD9BQ6WBX8 426 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 TMEM260Q9NX78 707 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 CCDC151A5D8V7 595 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 ATP2A1O14983 1001 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 KLRK1P26718 216 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 SNCBQ16143 134 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 CCDC174Q6PII3 467 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 MYCT1Q8N699 235 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 MB21D1Q8N884 522 aa13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
SLC6A1-201ENST00000287766 PPFIA4O75335 1185 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 EPB41P11171 864 aaKnown RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 PCP11498 1178 aaKnown RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 CACNB3P54284 484 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 UBXN2AP68543 259 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 TXNRD1Q16881 649 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 GKAP1Q5VSY0 366 aaPredicted RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 TRIM58Q8NG06 486 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 GJA10Q969M2 543 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 GBP5Q96PP8 586 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 FAM196BA6NMK8 535 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 KCNK3O14649 394 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 TADA3O75528 432 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 EEF1GP26641 437 aaKnown RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 EIF4A3P38919 411 aaKnown RBP13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 CDK8P49336 464 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 SESN3P58005 492 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 NCAPHQ15003 741 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 NAA35Q5VZE5 725 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 CPXCR1Q8N123 301 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 AGXT2Q9BYV1 514 aa13.78□□□□□ -0.2
SLC6A1-201ENST00000287766 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms