RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 TSG101Q99816 390 aa12.73□□□□□ -0.37
SIRPB1-202ENST00000279477 RIC8AQ9NPQ8 531 aa12.73□□□□□ -0.37
SIRPB1-202ENST00000279477 MYH4Q9Y623 1939 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 TULP2O00295 520 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 CENPPQ6IPU0 288 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 CCDC84Q86UT8 332 aaPredicted RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 CUL5Q93034 780 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 MMTAG2Q9BU76 263 aaKnown RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 ACBD3Q9H3P7 528 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 TXKP42681 527 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 MRPL12P52815 198 aaKnown RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 AMPD2Q01433 879 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 ANKRD40Q6AI12 368 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 MCTP2Q6DN12 878 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 PROM2Q8N271 834 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 PCMTD1Q96MG8 357 aaPredicted RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 UBXN6Q9BZV1 441 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 NT5C3AQ9H0P0 336 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 SERPINB13Q9UIV8 391 aa12.72□□□□□ -0.37
SIRPB1-202ENST00000279477 ZNF543Q08ER8 600 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 STK4Q13043 487 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 GRB10Q13322 594 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 MAN2A1Q16706 1144 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 LONRF2Q1L5Z9 754 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 CCDC122Q5T0U0 273 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 HDXQ7Z353 690 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 RAD54LQ92698 747 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 JAKMIP2Q96AA8 810 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 CCDC17Q96LX7 622 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 EDEM3Q9BZQ6 932 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 VAT1LQ9HCJ6 419 aa12.71□□□□□ -0.37
SIRPB1-202ENST00000279477 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.38
SIRPB1-202ENST00000279477 RNF225M0QZC1 329 aaPredicted RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 SEC31AO94979 1220 aaKnown RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 HNRNPH3P31942 346 aaKnown RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 CYP2C19P33261 490 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 SPA17Q15506 151 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 TRAPPC11Q7Z392 1133 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 CHP1Q99653 195 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 EHD4Q9H223 541 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 GUCA1BQ9UMX6 200 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 GTF2IP78347 998 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 MAP9Q49MG5 647 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 MIIPQ5JXC2 388 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 WDR59Q6PJI9 974 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 DPP8Q6V1X1 898 aaPredicted RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 LRRC15Q8TF66 581 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 FUT8Q9BYC5 575 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 ANKZF1Q9H8Y5 726 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 BLOC1S4Q9NUP1 217 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 CWC15Q9P013 229 aaKnown RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 REXO2Q9Y3B8 237 aaKnown RBP12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 ANKRD31Q8N7Z5 1873 aa12.7□□□□□ -0.38
SIRPB1-202ENST00000279477 HERVK_113P62684 666 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 VWA3BQ502W6 1294 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 PAPD7Q5XG87 772 aaKnown RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 WDR93Q6P2C0 686 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 HHIPL2Q6UWX4 724 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 LRRC47Q8N1G4 583 aaKnown RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 NUCKS1Q9H1E3 243 aaKnown RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 TMX4Q9H1E5 349 aaPredicted RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 NHEJ1Q9H9Q4 299 aaPredicted RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 SAR1BQ9Y6B6 198 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 A0A0U1RQJ8 604 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 POLRMTO00411 1230 aaKnown RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 MAP2K7O14733 419 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 ZBTB5O15062 677 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 FCER1AP12319 257 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 AKR1B1P15121 316 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 TNNI2P48788 182 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 CLK2P49760 499 aaKnown RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 VAV2P52735 878 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 KIF5AQ12840 1032 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 PICALMQ13492 652 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 ATRIPQ8WXE1 791 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 PNMA5Q96PV4 448 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 TMEM260Q9NX78 707 aa12.69□□□□□ -0.38
SIRPB1-202ENST00000279477 DDX25Q9UHL0 483 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms