RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CBX8Q9HC52 389 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 OPTNQ96CV9 577 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 ABCB11O95342 1321 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 SCN4AP35499 1836 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 SPDYE3A6NKU9 549 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
SSRP1-201ENST00000278412 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 NSMFQ6X4W1 530 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
SSRP1-201ENST00000278412 TTC12Q9H892 705 aaPredicted RBP13.26□□□□□ -0.29
SSRP1-201ENST00000278412 ZNF214Q9UL59 606 aaPredicted RBP13.26□□□□□ -0.29
SSRP1-201ENST00000278412 SOCS7O14512 581 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 SNRNP48Q6IEG0 339 aaKnown RBP13.25□□□□□ -0.29
SSRP1-201ENST00000278412 AS3MTQ9HBK9 375 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 FSTL1Q12841 308 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 CUL4BQ13620 913 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 HSP90AA4PQ58FG1 418 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 PDXDC2PQ6P474 469 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 CATSPERGQ6ZRH7 1159 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 PAGE5Q96GU1 130 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 TAAR1Q96RJ0 339 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
SSRP1-201ENST00000278412 IQCA1LA6NCM1 817 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 GCOM1H8Y6P7 765 aaPredicted RBP13.24□□□□□ -0.29
SSRP1-201ENST00000278412 POLR2MP0CAP2 368 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 PLCG1P19174 1290 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
SSRP1-201ENST00000278412 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
SSRP1-201ENST00000278412 USP14P54578 494 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 RPS6P62753 249 aaKnown RBP13.24□□□□□ -0.29
SSRP1-201ENST00000278412 POSTNQ15063 836 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 ZC3H15Q8WU90 426 aaKnown RBP13.24□□□□□ -0.29
SSRP1-201ENST00000278412 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 SORBS3O60504 671 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 PLA2G6O60733 806 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 DSG3P32926 999 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 SREBF1P36956 1147 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 MOGSQ13724 837 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 ARL6IP4Q66PJ3 421 aaKnown RBP13.24□□□□□ -0.29
SSRP1-201ENST00000278412 RASSF8Q8NHQ8 419 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 BCAS3Q9H6U6 928 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 POLD4Q9HCU8 107 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 TELO2Q9Y4R8 837 aa13.24□□□□□ -0.29
SSRP1-201ENST00000278412 ZNF165P49910 485 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 PTPN21Q16825 1174 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 ANKRD13AQ8IZ07 590 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 PAGR1Q9BTK6 254 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 RNF146Q9NTX7 359 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 IGLV3-22A0A075B6J6 115 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 MSH4O15457 936 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 ARP10275 920 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 BAATQ14032 418 aaPredicted RBP13.23□□□□□ -0.29
SSRP1-201ENST00000278412 COG2Q14746 738 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 SYTL5Q8TDW5 730 aaPredicted RBP13.23□□□□□ -0.29
SSRP1-201ENST00000278412 C12orf42Q96LP6 360 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 PNMA5Q96PV4 448 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 MAN1B1Q9UKM7 699 aa13.23□□□□□ -0.29
SSRP1-201ENST00000278412 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 BMP15O95972 392 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 CYP2C8P10632 490 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 CABP7Q86V35 215 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 IGSF22Q8N9C0 903 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 ETNPPLQ8TBG4 499 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 MED15Q96RN5 788 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 PIK3CDO00329 1044 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 MEIS1O00470 390 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 CHMP2AO43633 222 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 ITGB5P18084 799 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 UBA7P41226 1012 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 DPYDQ12882 1025 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 GRB10Q13322 594 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 IQCB1Q15051 598 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 L1TD1Q5T7N2 865 aaKnown RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 CST9Q5W186 159 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 PPP4R3AQ6IN85 833 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 PNMA8AQ86V59 439 aaPredicted RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 AOPEPQ8N6M6 819 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 DISC1Q9NRI5 854 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 LRWD1Q9UFC0 647 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
SSRP1-201ENST00000278412 MRPL11Q9Y3B7 192 aaKnown RBP13.22□□□□□ -0.29
SSRP1-201ENST00000278412 C19orf81C9J6K1 198 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 EML1O00423 815 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 CELF2O95319 508 aaKnown RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 NF2P35240 595 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 STAT6P42226 847 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms