RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CDAN1Q8IWY9 1227 aa14.48□□□□□ -0.09
C9orf3-201ENST00000277198 MSANTD4Q8NCY6 345 aa14.48□□□□□ -0.09
C9orf3-201ENST00000277198 BLZF1Q9H2G9 400 aa14.48□□□□□ -0.09
C9orf3-201ENST00000277198 THAP9Q9H5L6 903 aa14.48□□□□□ -0.09
C9orf3-201ENST00000277198 PRKG1Q13976 671 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 ZNF569Q5MCW4 686 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 AMOTL1Q8IY63 956 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 AK8Q96MA6 479 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 NUP88Q99567 741 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-201ENST00000277198 NAPGQ99747 312 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-201ENST00000277198 CCDC194A0A1B0GVG4 234 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 RHOBTB3O94955 611 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
C9orf3-201ENST00000277198 PRCPP42785 496 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 DIXDC1Q155Q3 683 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 PNMA1Q8ND90 353 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 WDR66Q8TBY9 1149 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 FUT8Q9BYC5 575 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 IRX2Q9BZI1 471 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-201ENST00000277198 DEFB129Q9H1M3 183 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 KBTBD4Q9NVX7 518 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 SERPINA10Q9UK55 444 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 SSC5DA1L4H1 1573 aa14.47□□□□□ -0.09
C9orf3-201ENST00000277198 LAMB1P07942 1786 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 MAST2Q6P0Q8 1798 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 LGALS16A8MUM7 142 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 ERLIN1O75477 346 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 KRT9P35527 623 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 ERVK-24P63145 666 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 GSTO1P78417 241 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 TFAP4Q01664 338 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 ORC2Q13416 577 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-201ENST00000277198 DZIP1Q86YF9 867 aaKnown RBP14.46□□□□□ -0.09
C9orf3-201ENST00000277198 RETREG2Q8NC44 543 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 OR8K1Q8NGG5 319 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 TBC1D22AQ8WUA7 517 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 STAMQ92783 540 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 DHTKD1Q96HY7 919 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-201ENST00000277198 VPS16Q9H269 839 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 ZNF287Q9HBT7 754 aa14.46□□□□□ -0.09
C9orf3-201ENST00000277198 BAZ2AQ9UIF9 1905 aaKnown RBP14.46□□□□□ -0.1
C9orf3-201ENST00000277198 MAP2K7O14733 419 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 PSMA7O14818 248 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 SASH3O75995 380 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 SEC31AO94979 1220 aaKnown RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 PARP1P09874 1014 aaKnown RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 UBA7P41226 1012 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 PPP4CP60510 307 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 UBXN1Q04323 297 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 SMC1AQ14683 1233 aaKnown RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 APOBEC3FQ8IUX4 373 aaKnown RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 MB21D1Q8N884 522 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 GIMAP8Q8ND71 665 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 DNAJC7Q99615 494 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 NUP58Q9BVL2 599 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 GBP3Q9H0R5 595 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 HAUS4Q9H6D7 363 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 IL17RBQ9NRM6 502 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 BARHL2Q9NY43 387 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 ZNF70Q9UC06 446 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 MYH13Q9UKX3 1938 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 BAG3O95817 575 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 CYP2D6P10635 497 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 SMARCA1P28370 1054 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 ARHGAP25P42331 645 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 DNM2P50570 870 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 GPS2Q13227 327 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 LONRF2Q1L5Z9 754 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 TSR1Q2NL82 804 aaKnown RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 SPDYE2Q495Y8 402 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 NAALADL2Q58DX5 795 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 APOBEC3HQ6NTF7 200 aaKnown RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 C2orf69Q8N8R5 385 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 CCDC47Q96A33 483 aaKnown RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 IQCDQ96DY2 449 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 ST7Q9NRC1 585 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 TAB2Q9NYJ8 693 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 MAD2L2Q9UI95 211 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 CAPN11Q9UMQ6 739 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 PCDHA6Q9UN73 950 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 PCDHA8Q9Y5H6 950 aa14.45□□□□□ -0.1
C9orf3-201ENST00000277198 EPN1Q9Y6I3 576 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-201ENST00000277198 CTAGE15A4D2H0 777 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 FAM155AB1AL88 458 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-201ENST00000277198 TCP10L2B9ZVM9 353 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 CTAGE8P0CG41 777 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 HOXA7P31268 230 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-201ENST00000277198 MMP14P50281 582 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 CTAGE6Q86UF2 777 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 IRF2BP1Q8IU81 584 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 CTAGE4Q8IX94 777 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 SLC35F6Q8N357 371 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 EHBP1Q8NDI1 1231 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 ZNF507Q8TCN5 953 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-201ENST00000277198 CALCOCO1Q9P1Z2 691 aa14.44□□□□□ -0.1
C9orf3-201ENST00000277198 MAGEC2Q9UBF1 373 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-201ENST00000277198 LUC7L2Q9Y383 392 aaKnown RBP14.44□□□□□ -0.1
C9orf3-201ENST00000277198 BICDL2A1A5D9 508 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms