RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 FOCADQ5VW36 1801 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 A0A1W2PQJ5 194 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 LGALS16A8MUM7 142 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 PSMD14O00487 310 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 TEX33O43247 280 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 KRT86O43790 486 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 PRDM1O75626 825 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 IPO7O95373 1038 aaKnown RBP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 TBC1D8O95759 1140 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 GYPCP04921 128 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 SLC10A3P09131 477 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 CCNE1P24864 410 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 CASP14P31944 242 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 GRAPQ13588 217 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 SEPT2Q15019 361 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 HABP4Q5JVS0 413 aaKnown RBP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 CC2D1AQ6P1N0 951 aaPredicted RBP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 TOGARAM2Q6ZUX3 1019 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 GRAMD1CQ8IYS0 662 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 GIMAP8Q8ND71 665 aaPredicted RBP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 GRAPLQ8TC17 118 aaPredicted RBP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 C7orf25Q9BPX7 421 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 TSGA10Q9BZW7 698 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 GLT8D2Q9H1C3 349 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 PSD3Q9NYI0 1048 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 CALCOCO1Q9P1Z2 691 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 MAD2L2Q9UI95 211 aa11.29□□□□□ -0.6
CPNE9-201ENST00000273027 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
CPNE9-201ENST00000273027 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PVALEFA0A1B0GWK0 134 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PARP1P09874 1014 aaKnown RBP11.28□□□□□ -0.6
CPNE9-201ENST00000273027 KRT9P35527 623 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PRCPP42785 496 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 NOVP48745 357 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 CKAP4Q07065 602 aaKnown RBP11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PSMD2Q13200 908 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 MAP9Q49MG5 647 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 IQCEQ6IPM2 695 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 CNNM4Q6P4Q7 775 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
CPNE9-201ENST00000273027 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
CPNE9-201ENST00000273027 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
CPNE9-201ENST00000273027 CALML4Q96GE6 196 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 WDR24Q96S15 920 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 DNAJC7Q99615 494 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 ARID3AQ99856 593 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 UBXN6Q9BZV1 441 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PCDHA6Q9UN73 950 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PCDHA8Q9Y5H6 950 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
CPNE9-201ENST00000273027 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
CPNE9-201ENST00000273027 CTAGE15A4D2H0 777 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 SOWAHDA6NJG2 315 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 STXBP3O00186 592 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 OR52Z1P0C646 297 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 CTAGE8P0CG41 777 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 PRDX5P30044 214 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 STX17P56962 302 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 UBXN1Q04323 297 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 PDIA5Q14554 519 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 MEA1Q16626 185 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 RAD9BQ6WBX8 426 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 C16orf86Q6ZW13 317 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 HDXQ7Z353 690 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 CTAGE6Q86UF2 777 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 CTAGE4Q8IX94 777 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 PARD6BQ9BYG5 372 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 DBNDD1Q9H9R9 158 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 ZNF446Q9NWS9 450 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
CPNE9-201ENST00000273027 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
CPNE9-201ENST00000273027 COL4A1P02462 1669 aa11.27□□□□□ -0.61
CPNE9-201ENST00000273027 CYP2D7A0A087X1C5 515 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 NDUFA10O95299 355 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 PLA2G4AP47712 749 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 ZBED6P86452 979 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 TMEM266Q2M3C6 531 aa11.26□□□□□ -0.61
CPNE9-201ENST00000273027 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms