RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 R3HDMLQ9H3Y0 253 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 KCNH4Q9UQ05 1017 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 CETPP11597 493 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 USP11P51784 963 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 POSTNQ15063 836 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 USP49Q70CQ1 688 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 SH3RF1Q7Z6J0 888 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 CCDC84Q86UT8 332 aaPredicted RBP17.38■□□□□ 0.37
COPS3-201ENST00000268717 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 FEZ1Q99689 392 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 AS3MTQ9HBK9 375 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 PICK1Q9NRD5 415 aa17.38■□□□□ 0.37
COPS3-201ENST00000268717 MEIS2O14770 477 aa17.37■□□□□ 0.37
COPS3-201ENST00000268717 PTPRAP18433 802 aa17.37■□□□□ 0.37
COPS3-201ENST00000268717 TRIML1Q8N9V2 468 aa17.37■□□□□ 0.37
COPS3-201ENST00000268717 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
COPS3-201ENST00000268717 CCSER1Q9C0I3 900 aa17.37■□□□□ 0.37
COPS3-201ENST00000268717 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
COPS3-201ENST00000268717 GPR25O00155 361 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 IQCB1Q15051 598 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 E2F4Q16254 413 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 UBE2SQ16763 222 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
COPS3-201ENST00000268717 MTMR9Q96QG7 549 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 PNMA2Q9UL42 364 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 ZHX2Q9Y6X8 837 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 CYP3A7-CYP3A51PA0A087WV96 503 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 CXCL11O14625 94 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 EDIL3O43854 480 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 FDX1P10109 184 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 CYP3A7P24462 503 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.37
COPS3-201ENST00000268717 CRHR2Q13324 411 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 C11orf57Q6ZUT1 292 aaPredicted RBP17.36■□□□□ 0.37
COPS3-201ENST00000268717 CRYGNQ8WXF5 182 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 MBOAT7Q96N66 472 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 ANO3Q9BYT9 981 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 CUEDC2Q9H467 287 aa17.36■□□□□ 0.37
COPS3-201ENST00000268717 ABCB11O95342 1321 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 A0A087X0B3 334 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 BTBD19C9JJ37 291 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 SMC2O95347 1197 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 SARSP49591 514 aaKnown RBP17.35■□□□□ 0.37
COPS3-201ENST00000268717 PNOCQ13519 176 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 CALCRLQ16602 461 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 HS1BP3Q53T59 392 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 PRPF38AQ8NAV1 312 aaKnown RBP17.35■□□□□ 0.37
COPS3-201ENST00000268717 DHX58Q96C10 678 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 C12orf42Q96LP6 360 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 RAB34Q9BZG1 259 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 MAGEF1Q9HAY2 307 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 MRPL11Q9Y3B7 192 aaKnown RBP17.35■□□□□ 0.37
COPS3-201ENST00000268717 AFG3L2Q9Y4W6 797 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 PCDHA5Q9Y5H7 936 aa17.35■□□□□ 0.37
COPS3-201ENST00000268717 MYL1P05976 194 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 SNAP25P60880 206 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 PDIA5Q14554 519 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 ZYXQ15942 572 aaKnown RBP17.34■□□□□ 0.37
COPS3-201ENST00000268717 TMEM266Q2M3C6 531 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 CT47A1Q5JQC4 288 aaPredicted RBP17.34■□□□□ 0.37
COPS3-201ENST00000268717 LUZP1Q86V48 1076 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 PDILTQ8N807 584 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 KIFC2Q96AC6 838 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 SLF1Q9BQI6 1058 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 ZCCHC17Q9NP64 241 aaKnown RBP17.34■□□□□ 0.37
COPS3-201ENST00000268717 DISC1Q9NRI5 854 aa17.34■□□□□ 0.37
COPS3-201ENST00000268717 USP17L15C9J2P7 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L13C9JLJ4 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L11C9JVI0 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L18D6R9N7 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L22D6RA61 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L17D6RBQ6 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L19D6RCP7 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L20D6RJB6 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 OPLAHO14841 1288 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 FKTNO75072 461 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 SREBF1P36956 1147 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 UBA7P41226 1012 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 BACE1P56817 501 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L24Q0WX57 530 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 SEMA3FQ13275 785 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 MOGSQ13724 837 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 TAF1CQ15572 869 aaPredicted RBP17.33■□□□□ 0.37
COPS3-201ENST00000268717 DPCR1Q3MIW9 517 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USH1GQ495M9 461 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 PDXDC2PQ6P474 469 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 USP17L6PQ6QN14 398 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 ZNF280CQ8ND82 737 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 ERCC4Q92889 916 aaPredicted RBP17.33■□□□□ 0.37
COPS3-201ENST00000268717 SMARCE1Q969G3 411 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 PAGE5Q96GU1 130 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.37
COPS3-201ENST00000268717 A0A0G2JLL6 359 aaPredicted RBP17.32■□□□□ 0.36
COPS3-201ENST00000268717 SPDYE3A6NKU9 549 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 C19orf81C9J6K1 198 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms