RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SPATA20Q8TB22 786 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 CASKIN2Q8WXE0 1202 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 EPSTI1Q96J88 318 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 MYL10Q9BUA6 226 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 JAG2Q9Y219 1238 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 MAP3K15Q6ZN16 1313 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 M0R2C6 588 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 TRIM37O94972 964 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 ITGA6P23229 1130 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 MAGEA10P43363 369 aaPredicted RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 COPB1P53618 953 aaKnown RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 RNASE9P60153 205 aaKnown RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 WASHC4Q2M389 1173 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 HHATQ5VTY9 493 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 CACNA2D3Q8IZS8 1091 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 KIF2BQ8N4N8 673 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 UBE2OQ9C0C9 1292 aaKnown RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 LRWD1Q9UFC0 647 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 MTMR7Q9Y216 660 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 PCDHB6Q9Y5E3 794 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 ITIH6Q6UXX5 1313 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 B4DLN1 442 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 CPLX1O14810 134 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 DRD4P21917 467 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 ERCC5P28715 1186 aaPredicted RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 ADORA1P30542 326 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 UAP1Q16222 522 aaPredicted RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 PDCD2Q16342 344 aaPredicted RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 TNNI3KQ59H18 835 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 SEPT12Q8IYM1 358 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 RPGRIP1Q96KN7 1286 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 SYT15Q9BQS2 421 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 BLZF1Q9H2G9 400 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 TMBIM4Q9HC24 238 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 ZFATQ9P243 1243 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 ZMYND8Q9ULU4 1186 aaPredicted RBP9.69□□□□□ -0.86
VAPB-201ENST00000265619 TRIM33Q9UPN9 1127 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 FPGT-TNNI3KV9GXZ4 949 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 RASSF10A6NK89 507 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 SMAPO00193 183 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 PRC1O43663 620 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 EVI5O60447 810 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 SMIM24O75264 130 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 GUCY1A2P33402 732 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 ALDH5A1P51649 535 aaPredicted RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 UBXN1Q04323 297 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 IFFO1Q0D2I5 559 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 ANKRD13CQ8N6S4 541 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 OSBPL9Q96SU4 736 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 TSC22D3Q99576 134 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 C5orf60A6NFR6 353 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 BTBD18B2RXH4 712 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 SH2B2O14492 632 aaPredicted RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 RANBP6O60518 1105 aaKnown RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 FLT3P36888 993 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 CDC37Q16543 378 aaPredicted RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 ANKRD20A2Q5SQ80 823 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 ANKRD20A1Q5TYW2 823 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 ANKRD20A3Q5VUR7 823 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 NUGGCQ68CJ6 796 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 PPP4R3AQ6IN85 833 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 CCDC63Q8NA47 563 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 CSRNP2Q9H175 543 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 ABCF3Q9NUQ8 709 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 MYH2Q9UKX2 1941 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 TRIM49BA6NDI0 452 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 FAM205CA6NFA0 338 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 H0YGN5 161 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 NEFHP12036 1026 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 GLE1Q53GS7 698 aaKnown RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 ZMYM1Q5SVZ6 1142 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 ANO7Q6IWH7 933 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 NLRP10Q86W26 655 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
VAPB-201ENST00000265619 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
VAPB-201ENST00000265619 C2CD2Q9Y426 696 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 NFS1Q9Y697 457 aa9.68□□□□□ -0.86
VAPB-201ENST00000265619 HEXIM1O94992 359 aaKnown RBP9.67□□□□□ -0.86
VAPB-201ENST00000265619 PDHA1P08559 390 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 FOXO4P98177 505 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 RNF220Q5VTB9 566 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 SUSD4Q5VX71 490 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 C8orf74Q6P047 294 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 NCAPG2Q86XI2 1143 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 IRF2BP1Q8IU81 584 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 NOP53Q9NZM5 478 aaKnown RBP9.67□□□□□ -0.86
VAPB-201ENST00000265619 SLC12A4Q9UP95 1085 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 MAST3O60307 1309 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 NHSL1Q5SYE7 1610 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 CCT8L1PA6NM43 557 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 WNT7AO00755 349 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 ZSCAN9O15535 394 aaPredicted RBP9.67□□□□□ -0.86
VAPB-201ENST00000265619 SHBGP04278 402 aa9.67□□□□□ -0.86
VAPB-201ENST00000265619 IFIT1P09914 478 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms