RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
SSBP1-201ENST00000265304 GABRQQ9UN88 632 aa16.37■□□□□ 0.21
SSBP1-201ENST00000265304 PGK2P07205 417 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 NLRP5P59047 1200 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 PRKCZQ05513 592 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 PKN2Q16513 984 aaKnown RBP16.36■□□□□ 0.21
SSBP1-201ENST00000265304 XRRA1Q6P2D8 792 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 REXO1Q8N1G1 1221 aaKnown RBP16.36■□□□□ 0.21
SSBP1-201ENST00000265304 NPLOC4Q8TAT6 608 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
SSBP1-201ENST00000265304 TAAR1Q96RJ0 339 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 KCNJ14Q9UNX9 436 aa16.36■□□□□ 0.21
SSBP1-201ENST00000265304 EDIL3O43854 480 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 CYP3A4P08684 503 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
SSBP1-201ENST00000265304 DDIT3P35638 169 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 LARP1BQ659C4 914 aaKnown RBP16.35■□□□□ 0.21
SSBP1-201ENST00000265304 CTU1Q7Z7A3 348 aaKnown RBP16.35■□□□□ 0.21
SSBP1-201ENST00000265304 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 VSIG10LQ86VR7 867 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 RMDN3Q96TC7 470 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 FOXP1Q9H334 677 aaPredicted RBP16.35■□□□□ 0.21
SSBP1-201ENST00000265304 PXMP2Q9NR77 195 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 NRBP1Q9UHY1 535 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 PCDHA6Q9UN73 950 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 PTPN22Q9Y2R2 807 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 PCDHA8Q9Y5H6 950 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 SYNGAP1Q96PV0 1343 aa16.35■□□□□ 0.21
SSBP1-201ENST00000265304 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
SSBP1-201ENST00000265304 ASB14A6NK59 587 aa16.34■□□□□ 0.21
SSBP1-201ENST00000265304 SYT1P21579 422 aa16.34■□□□□ 0.21
SSBP1-201ENST00000265304 SREBF1P36956 1147 aa16.34■□□□□ 0.21
SSBP1-201ENST00000265304 ANP32AP39687 249 aaKnown RBP16.34■□□□□ 0.21
SSBP1-201ENST00000265304 ALDH5A1P51649 535 aaPredicted RBP16.34■□□□□ 0.21
SSBP1-201ENST00000265304 TRIM29Q14134 588 aa16.34■□□□□ 0.21
SSBP1-201ENST00000265304 PDCD2LQ9BRP1 358 aa16.34■□□□□ 0.21
SSBP1-201ENST00000265304 TINF2Q9BSI4 451 aa16.34■□□□□ 0.21
SSBP1-201ENST00000265304 KATNBL1Q9H079 304 aa16.34■□□□□ 0.21
SSBP1-201ENST00000265304 B4DLN1 442 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 STAM2O75886 525 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 USP11P51784 963 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 UBE2SQ16763 222 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 MAP3K21Q5TCX8 1036 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 PCNX4Q63HM2 1172 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 DIS3L2Q8IYB7 885 aaKnown RBP16.33■□□□□ 0.2
SSBP1-201ENST00000265304 OXER1Q8TDS5 423 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 PURBQ96QR8 312 aaKnown RBP16.33■□□□□ 0.2
SSBP1-201ENST00000265304 FLRT1Q9NZU1 646 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-201ENST00000265304 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
SSBP1-201ENST00000265304 RBM47A0AV96 593 aaKnown RBP16.32■□□□□ 0.2
SSBP1-201ENST00000265304 SPDYE3A6NKU9 549 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 BTBD18B2RXH4 712 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 SNAI1O95863 264 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-201ENST00000265304 NR3C2P08235 984 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 CYP2B6P20813 491 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 CIITAP33076 1130 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 KRT2P35908 639 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 PGM5Q15124 567 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 MOXD1Q6UVY6 613 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 MBOAT7Q96N66 472 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 ANO3Q9BYT9 981 aa16.32■□□□□ 0.2
SSBP1-201ENST00000265304 CYP3A7-CYP3A51PA0A087WV96 503 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 ADCY3O60266 1144 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
SSBP1-201ENST00000265304 CYP3A7P24462 503 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 MRPS9P82933 396 aaKnown RBP16.31■□□□□ 0.2
SSBP1-201ENST00000265304 SAFBQ15424 915 aaKnown RBP eCLIP16.31■□□□□ 0.2
SSBP1-201ENST00000265304 CCL14Q16627 93 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 FBXO46Q6PJ61 603 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-201ENST00000265304 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 TRIB2Q92519 343 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 INPP4AQ96PE3 977 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-201ENST00000265304 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 TMEM260Q9NX78 707 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 MTMR6Q9Y217 621 aa16.31■□□□□ 0.2
SSBP1-201ENST00000265304 MYH15Q9Y2K3 1946 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 STX6O43752 255 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 NR5A1Q13285 461 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 ARHGEF16Q5VV41 709 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 JAKMIP3Q5VZ66 844 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 ARMCX2Q7L311 632 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 NOSTRINQ8IVI9 506 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 RASGRP4Q8TDF6 673 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
SSBP1-201ENST00000265304 ABHD16BQ9H3Z7 469 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 EHMT1Q9H9B1 1298 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 CENPFP49454 3210 aa16.3■□□□□ 0.2
SSBP1-201ENST00000265304 TCHHQ07283 1943 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 MEIS1O00470 390 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 MAFGO15525 162 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 RGS20O76081 388 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 HMGCRP04035 888 aa16.29■□□□□ 0.2
SSBP1-201ENST00000265304 HSP90AA1P07900 732 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms