RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 PDE4DQ08499 809 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 ACVR2BQ13705 512 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 ANKRD1Q15327 319 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 PFKFB3Q16875 520 aaPredicted RBP8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 ARHGEF16Q5VV41 709 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 MCF2L2Q86YR7 1114 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 TRMT44Q8IYL2 757 aaKnown RBP8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 GTF3C6Q969F1 213 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 PSTPIP2Q9H939 334 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 MYH7BA7E2Y1 1941 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 SYNGAP1Q96PV0 1343 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 SZT2Q5T011 3432 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 MEIS2O14770 477 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 IGHA2P01877 340 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 HSD17B4P51659 736 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 RABEP1Q15276 862 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 MAMDC4Q6UXC1 1216 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 SEPT14Q6ZU15 432 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 TRIM22Q8IYM9 498 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 UIMC1Q96RL1 719 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 KATNBL1Q9H079 304 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 PXMP2Q9NR77 195 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 BARHL2Q9NY43 387 aa8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 DDX20Q9UHI6 824 aaKnown RBP8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 DIS3Q9Y2L1 958 aaKnown RBP8.34□□□□□ -1.08
DEPDC1B-201ENST00000265036 MYADML2A6NDP7 307 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 SMCO2A6NFE2 343 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 ASB14A6NK59 587 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 SEPT4O43236 478 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 SGPL1O95470 568 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 SMARCA1P28370 1054 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 GJA8P48165 433 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 ADCY7P51828 1080 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 SSRP1Q08945 709 aaKnown RBP8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 JAKMIP3Q5VZ66 844 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 LHX8Q68G74 356 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 COPS5Q92905 334 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 PDCD2LQ9BRP1 358 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 RNF26Q9BY78 433 aaPredicted RBP8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 ABHD16BQ9H3Z7 469 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 PNMA2Q9UL42 364 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 KCNJ14Q9UNX9 436 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 TRIOBPQ9H2D6 2365 aa8.33□□□□□ -1.08
DEPDC1B-201ENST00000265036 PRPF3O43395 683 aaKnown RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 ARIH2O95376 493 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 AKR1A1P14550 325 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 PGM5Q15124 567 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 CPLX2Q6PUV4 134 aaKnown RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 NSUN6Q8TEA1 469 aaKnown RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 PPP1R13LQ8WUF5 828 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 CUL5Q93034 780 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 XPNPEP3Q9NQH7 507 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 RTEL1Q9NZ71 1219 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 PKD2L1Q9P0L9 805 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 LIMCH1Q9UPQ0 1083 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 ALPK3Q96L96 1907 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 ST18O60284 1047 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 FARP2O94887 1054 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 NR3C2P08235 984 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 RARBP10826 455 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 BEX3Q00994 111 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 PPP2R5BQ15173 497 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 NSUN7Q8NE18 718 aaKnown RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 FERMT2Q96AC1 680 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 PAWRQ96IZ0 340 aaKnown RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 CDH23Q9H251 3354 aa8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 ORC3Q9UBD5 711 aaPredicted RBP8.32□□□□□ -1.08
DEPDC1B-201ENST00000265036 SMPD1P17405 629 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 EDNRBP24530 442 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 GUCY1B3Q02153 619 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 IFFO2Q5TF58 517 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 TAPT1Q6NXT6 567 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 DNERQ8NFT8 737 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 RBAK-RBAKDNI3L0D1 243 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 RGS20O76081 388 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 DEXIO95424 95 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 FDPSP14324 419 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 SP4Q02446 784 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 TNFAIP2Q03169 654 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 TRAF1Q13077 416 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 LY6KQ17RY6 165 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 TLK2Q86UE8 772 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 REXO1Q8N1G1 1221 aaKnown RBP8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 RGS22Q8NE09 1264 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 WDR11Q9BZH6 1224 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 BCAS3Q9H6U6 928 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 RIC8AQ9NPQ8 531 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 FAM184BQ9ULE4 1060 aa8.31□□□□□ -1.08
DEPDC1B-201ENST00000265036 CDKL5O76039 1030 aa8.3□□□□□ -1.08
DEPDC1B-201ENST00000265036 MNX1P50219 401 aaPredicted RBP8.3□□□□□ -1.08
DEPDC1B-201ENST00000265036 NLRP5P59047 1200 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms