RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 CNOT6LQ96LI5 555 aaKnown RBP16.4■□□□□ 0.22
NID1-201ENST00000264187 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
NID1-201ENST00000264187 LRRC41Q15345 812 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
NID1-201ENST00000264187 PSDA5PKW4 1024 aaPredicted RBP16.4■□□□□ 0.22
NID1-201ENST00000264187 SYNDIG1LA6NDD5 238 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 H7C1D1 291 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 MED4Q9NPJ6 270 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 DNAJC17Q9NVM6 304 aaKnown RBP16.4■□□□□ 0.22
NID1-201ENST00000264187 NRBP1Q9UHY1 535 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 HNRNPDLO14979 420 aaKnown RBP16.4■□□□□ 0.22
NID1-201ENST00000264187 HEXIM1O94992 359 aaKnown RBP16.4■□□□□ 0.22
NID1-201ENST00000264187 GYG1P46976 350 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 RPS6KC1Q96S38 1066 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 COL4A3BPQ9Y5P4 624 aa16.4■□□□□ 0.22
NID1-201ENST00000264187 MAPK4P31152 587 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 PTH1RQ03431 593 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 TAF11Q15544 211 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 HOOK2Q96ED9 719 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 PCIF1Q9H4Z3 704 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
NID1-201ENST00000264187 PYCARDQ9ULZ3 195 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 COPB1P53618 953 aaKnown RBP16.39■□□□□ 0.21
NID1-201ENST00000264187 DOK7Q18PE1 504 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 C7orf31Q8N865 590 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 SEPT9Q9UHD8 586 aaPredicted RBP16.39■□□□□ 0.21
NID1-201ENST00000264187 PCDHA7Q9UN72 937 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 RRP15Q9Y3B9 282 aaKnown RBP16.39■□□□□ 0.21
NID1-201ENST00000264187 A0A087WWV3 80 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 CTNND1O60716 968 aaKnown RBP16.39■□□□□ 0.21
NID1-201ENST00000264187 PTGDRQ13258 359 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 ART3Q13508 389 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 FBXO11Q86XK2 927 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 PPP1R16BQ96T49 567 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
NID1-201ENST00000264187 KIAA0825Q8IV33 1275 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 SLFN12Q8IYM2 578 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 FANCBQ8NB91 859 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 DRC3Q9H069 523 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 SLC38A10Q9HBR0 1119 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 DAAM1Q9Y4D1 1078 aa16.39■□□□□ 0.21
NID1-201ENST00000264187 FTCDO95954 541 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 PCGF5Q86SE9 256 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 TNRQ92752 1358 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 TNKSO95271 1327 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 ATP6V1E1P36543 226 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 THOC5Q13769 683 aaKnown RBP16.38■□□□□ 0.21
NID1-201ENST00000264187 GCKRQ14397 625 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 FBXL13Q8NEE6 735 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 TLK1Q9UKI8 766 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 MAP3K19Q56UN5 1328 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 MROH5Q6ZUA9 1318 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 SPATA1Q5VX52 437 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 FAM186BQ8IYM0 893 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 SPICE1Q8N0Z3 855 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 MAML1Q92585 1016 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
NID1-201ENST00000264187 CALN1Q9BXU9 219 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 GTPBP6O43824 516 aaPredicted RBP16.38■□□□□ 0.21
NID1-201ENST00000264187 KRT1P04264 644 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 SRGAP2BP0DMP2 458 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 MFAP3P55082 362 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 NUDCD3Q8IVD9 361 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 IFNL3Q8IZI9 196 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 CCDC124Q96CT7 223 aaKnown RBP16.38■□□□□ 0.21
NID1-201ENST00000264187 TPCN1Q9ULQ1 816 aa16.38■□□□□ 0.21
NID1-201ENST00000264187 A0A0D9SFI3 127 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 CLIC2O15247 247 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 PKP1Q13835 747 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 DARS2Q6PI48 645 aaKnown RBP16.37■□□□□ 0.21
NID1-201ENST00000264187 TUBGCP2Q9BSJ2 902 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 DSCC1Q9BVC3 393 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 MIS12Q9H081 205 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 AKT3Q9Y243 479 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 PTPN23Q9H3S7 1636 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 BRD1O95696 1058 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 POLR3CQ9BUI4 534 aaPredicted RBP16.37■□□□□ 0.21
NID1-201ENST00000264187 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 MT-ND3P03897 115 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 SZRD1Q7Z422 152 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 NT5C1BQ96P26 610 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 MRPL11Q9Y3B7 192 aaKnown RBP16.37■□□□□ 0.21
NID1-201ENST00000264187 NESP48681 1621 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 SCG2P13521 617 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 BLVRAP53004 296 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 E2F4Q16254 413 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 CERKLQ49MI3 558 aaPredicted RBP16.37■□□□□ 0.21
NID1-201ENST00000264187 TRIM67Q6ZTA4 783 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 SULF1Q8IWU6 871 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 SCINQ9Y6U3 715 aa16.37■□□□□ 0.21
NID1-201ENST00000264187 MAP3K7O43318 606 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms