RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 POLR3EQ9NVU0 708 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 MYO1FO00160 1098 aa19■□□□□ 0.63
NOTCH3-201ENST00000263388 APOEP02649 317 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 A1BGP04217 495 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 DLGAP5Q15398 846 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 RAPH1Q70E73 1250 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 FBXO18Q8NFZ0 1043 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 SLC39A2Q9NP94 309 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 TXLNGQ9NUQ3 528 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 RNF14Q9UBS8 474 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 XKR9Q5GH70 373 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 LRRC43Q8N309 656 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 TMEM191BP0C7N4 346 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 GPIHBP1Q8IV16 184 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 LIG3P49916 1009 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 SCRN1Q12765 414 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 ADAT2Q7Z6V5 191 aaKnown RBP18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 LGR6Q9HBX8 967 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 MAD1L1Q9Y6D9 718 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 ZBTB24O43167 697 aaPredicted RBP18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 LPXNO60711 386 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 ARHGEF18Q6ZSZ5 1173 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 NME8Q8N427 588 aa18.99■□□□□ 0.63
NOTCH3-201ENST00000263388 PDE6AP16499 860 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 CERKLQ49MI3 558 aaPredicted RBP18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 CSADQ9Y600 493 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 GSPT1P15170 499 aaKnown RBP18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 ITKQ08881 620 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 IFT88Q13099 833 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 SPOUT1Q5T280 376 aaKnown RBP18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 DPH5Q9H2P9 285 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 LMTK3Q96Q04 1460 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 RAB44Q7Z6P3 723 aaPredicted RBP18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 FBXO11Q86XK2 927 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 MAGOHBQ96A72 148 aaKnown RBP18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 EFHD1Q9BUP0 239 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 TUBB6Q9BUF5 446 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 MLXIPQ9HAP2 919 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 DISC1Q9NRI5 854 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 STK17AQ9UEE5 414 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 TNKSO95271 1327 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 SPDYE16A6NNV3 312 aaPredicted RBP18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 MCF2LO15068 1137 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 ASPHQ12797 758 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 SPDYE2Q495Y8 402 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 MFAP3P55082 362 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 SCYL3Q8IZE3 742 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 S100BP04271 92 aaPredicted RBP18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 CCT5P48643 541 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 RASIP1Q5U651 963 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 HDAC11Q96DB2 347 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 USP40Q9NVE5 1235 aa18.98■□□□□ 0.63
NOTCH3-201ENST00000263388 CDR2Q01850 454 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 GON4LQ3T8J9 2241 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 GAP43P17677 238 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 EIF4A1P60842 406 aaKnown RBP18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 PBKQ96KB5 322 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 ATP10AO60312 1499 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 IKBKBO14920 756 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 ASPRV1Q53RT3 343 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 CMTR1Q8N1G2 835 aaKnown RBP18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 RPS8P62241 208 aaKnown RBP18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 DCAF15Q66K64 600 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 SDR42E1Q8WUS8 393 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 ITSN1Q15811 1721 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 PPP2R5AQ15172 486 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 FNBP4Q8N3X1 1017 aaPredicted RBP18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 PPWD1Q96BP3 646 aaKnown RBP18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 PCDHB4Q9Y5E5 795 aa18.97■□□□□ 0.63
NOTCH3-201ENST00000263388 TYW5A2RUC4 315 aaKnown RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 PTH1RQ03431 593 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 TCIRG1Q13488 830 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 FAM26FQ5R3K3 315 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 RNF26Q9BY78 433 aaPredicted RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 GPATCH4Q5T3I0 446 aaKnown RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 DAAM1Q9Y4D1 1078 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 TET3O43151 1660 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 PGRMC1O00264 195 aaKnown RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 USP44Q9H0E7 712 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 CLIC4Q9Y696 253 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 ANKRD35Q8N283 1001 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 MORC4Q8TE76 937 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 LARP4BQ92615 738 aaKnown RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 KIAA1024Q9UPX6 916 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 POC1B-GALNT4F8VUJ3 575 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 ALS2CLQ60I27 953 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 ANO3Q9BYT9 981 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 SYF2O95926 243 aaKnown RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 FOSP01100 380 aaPredicted RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 PSMC2P35998 433 aaKnown RBP18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 KCTD16Q68DU8 428 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 PREX2Q70Z35 1606 aa18.96■□□□□ 0.63
NOTCH3-201ENST00000263388 SAT1P21673 171 aa18.96■□□□□ 0.62
NOTCH3-201ENST00000263388 SKA2Q8WVK7 121 aaPredicted RBP18.96■□□□□ 0.62
NOTCH3-201ENST00000263388 PPME1Q9Y570 386 aa18.96■□□□□ 0.62
NOTCH3-201ENST00000263388 H7C0C1 242 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 NR2F2P24468 414 aa18.95■□□□□ 0.62
NOTCH3-201ENST00000263388 ATP5OP48047 213 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms