RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 PHKA1P46020 1223 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 USP40Q9NVE5 1235 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 PRKAB2O43741 272 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 ABL1P00519 1130 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 GTF2IP78347 998 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMG6-201ENST00000263073 TRIM50Q86XT4 487 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 ELAC2Q9BQ52 826 aaKnown RBP13.14□□□□□ -0.31
SMG6-201ENST00000263073 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 PPP1R12AO14974 1030 aaPredicted RBP13.14□□□□□ -0.31
SMG6-201ENST00000263073 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 RAPH1Q70E73 1250 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 PPWD1Q96BP3 646 aaKnown RBP13.14□□□□□ -0.31
SMG6-201ENST00000263073 HAUS1Q96CS2 278 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 C1orf112Q9NSG2 853 aa13.14□□□□□ -0.31
SMG6-201ENST00000263073 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 PDHA1P08559 390 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 NR2F2P24468 414 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 AZI2Q9H6S1 392 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 ACSL3O95573 720 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 INHBAP08476 426 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 ECE1P42892 770 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 KMT5BQ4FZB7 885 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 C4orf50Q6ZRC1 276 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 CCDC125Q86Z20 511 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
SMG6-201ENST00000263073 GGCXP38435 758 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 PIK3CAP42336 1068 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 POLA2Q14181 598 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 CCDC144BQ3MJ40 725 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
SMG6-201ENST00000263073 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
SMG6-201ENST00000263073 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
SMG6-201ENST00000263073 SGO2Q562F6 1265 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 FAM167BQ9BTA0 163 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 PLAAQ9Y263 795 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 CFAP36Q96G28 342 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 C19orf44Q9H6X5 657 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 ADAM21Q9UKJ8 722 aa13.13□□□□□ -0.31
SMG6-201ENST00000263073 CFLARO15519 480 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 NDUFA10O95299 355 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 MSH2P43246 934 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
SMG6-201ENST00000263073 P2RX5Q93086 422 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 ZNF653Q96CK0 615 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 LZTS2Q9BRK4 669 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 YIPF3Q9GZM5 350 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 FAM135BQ49AJ0 1406 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 PPP6R2O75170 966 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 TOM1L1O75674 476 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 RNF169Q8NCN4 708 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 GLG1Q92896 1179 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 Q9H521 79 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
SMG6-201ENST00000263073 ALAS1P13196 640 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 SLC16A2P36021 539 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 MAML1Q92585 1016 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
SMG6-201ENST00000263073 GREM2Q9H772 168 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 SUGCTQ9HAC7 445 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 ANAPC5Q9UJX4 755 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 SPDYE16A6NNV3 312 aaPredicted RBP13.12□□□□□ -0.31
SMG6-201ENST00000263073 APOEP02649 317 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 PDE1BQ01064 536 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 PPP2R5BQ15173 497 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 SPICE1Q8N0Z3 855 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
SMG6-201ENST00000263073 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 HADHQ16836 314 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 TCOF1Q13428 1488 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 SLC4A1P02730 911 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 LONP1P36776 959 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 NSFP46459 744 aaKnown RBP13.11□□□□□ -0.31
SMG6-201ENST00000263073 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 KCTD1Q719H9 257 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 DISC1Q9NRI5 854 aa13.11□□□□□ -0.31
SMG6-201ENST00000263073 HDAC6Q9UBN7 1215 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms