RNA–Protein interactions for RNA: ENST00000261173.6

ATP2B1-201, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B1, Length 6,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-201ENST00000261173 TUBGCP5Q96RT8 1024 aa3.39□□□□□ -1.87
ATP2B1-201ENST00000261173 LSG1Q9H089 658 aaKnown RBP3.39□□□□□ -1.87
ATP2B1-201ENST00000261173 TMBIM4Q9HC24 238 aa3.39□□□□□ -1.87
ATP2B1-201ENST00000261173 TMA7Q9Y2S6 64 aaKnown RBP3.39□□□□□ -1.87
ATP2B1-201ENST00000261173 N6AMT1Q9Y5N5 214 aa3.39□□□□□ -1.87
ATP2B1-201ENST00000261173 ARHGAP10A1A4S6 786 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 NDC80O14777 642 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 S100BP04271 92 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 ATP1A1P05023 1023 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 EIF2S1P05198 315 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 MYCLP1P12525 358 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 ITGB3BPQ13352 177 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CNPY1Q3B7I2 92 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 LRRC49Q8IUZ0 686 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SIX5Q8N196 739 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 AGGF1Q8N302 714 aaeCLIP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 LRRC43Q8N309 656 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 DHTKD1Q96HY7 919 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 NACAP1Q9BZK3 213 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 EPB41L5Q9HCM4 733 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 INTS9Q9NV88 658 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TBCCD1Q9NVR7 557 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 NFU1Q9UMS0 254 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 PIK3R4Q99570 1358 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 VAMP4O75379 141 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 GLRX3O76003 335 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CALB2P22676 271 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SPAG1Q07617 926 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 KIF22Q14807 665 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 PDCD4Q53EL6 469 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 DAB2IPQ5VWQ8 1189 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 PATL1Q86TB9 770 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 C11orf74Q86VG3 221 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 ARHGAP24Q8N264 748 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SCAIQ8N9R8 606 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 RETREG2Q8NC44 543 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 PIP4K2CQ8TBX8 421 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 STK32AQ8WU08 396 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 USP28Q96RU2 1077 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 FHDC1Q9C0D6 1143 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.38□□□□□ -1.877e-10■■□□□ 14.3
ATP2B1-201ENST00000261173 ZRANB1Q9UGI0 708 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SLC12A4Q9UP95 1085 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SSX2IPQ9Y2D8 614 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 RBM8AQ9Y5S9 174 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 EPN1Q9Y6I3 576 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 HTR3EA5X5Y0 456 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TIMM44O43615 452 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CBFA2T3O75081 653 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CIB2O75838 187 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 KRT4P19013 534 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 ATP5DP30049 168 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CD97P48960 835 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 NSUN2Q08J23 767 aaKnown RBP eCLIP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TMEM62Q0P6H9 643 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 PNOCQ13519 176 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 DCTN2Q13561 401 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 KAZNQ674X7 775 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CCSAPQ6IQ19 270 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 LRRC8BQ6P9F7 803 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SPICE1Q8N0Z3 855 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 LSM14AQ8ND56 463 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 XPO6Q96QU8 1125 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 LRRC1Q9BTT6 524 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CCDC68Q9H2F9 335 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TIMMDC1Q9NPL8 285 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 ARHGEF38Q9NXL2 777 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CYP39A1Q9NYL5 469 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 NESP48681 1621 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TRAPPC8Q9Y2L5 1435 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CCDC162PA2VCL2 907 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 H0Y3Z8 333 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 EIF3FO00303 357 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CYTH3O43739 400 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 DKC1O60832 514 aaKnown RBP eCLIP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 LGR5O75473 907 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 HEXIM1O94992 359 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 UBTFL6P0CB48 400 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 PFKFB1P16118 471 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TNFRSF8P28908 595 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 EIF3BP55884 814 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TBX2Q13207 712 aaPredicted RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 GSTA3Q16772 222 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 MAEAQ7L5Y9 396 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 UHMK1Q8TAS1 419 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 GDAP1Q8TB36 358 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 RBM46Q8TBY0 533 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.38□□□□□ -1.873e-6■■■■■ 50.8
ATP2B1-201ENST00000261173 TRIM35Q9UPQ4 493 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 GOLGA8TH3BQL2 631 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SH3BP5O60239 455 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 DTNBO60941 627 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 SURF6O75683 361 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 GOLGA8HP0CJ92 632 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 PYGMP11217 842 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 CMA1P23946 247 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 TMOD1P28289 359 aa3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 MAGOHP61326 146 aaKnown RBP3.38□□□□□ -1.87
ATP2B1-201ENST00000261173 BASP1P80723 227 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms