RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TXKP42681 527 aa31.17■■■□□ 2.58
CCM2-201ENST00000258781 SNAP25P60880 206 aa31.17■■■□□ 2.58
CCM2-201ENST00000258781 FMR1Q06787 632 aaKnown RBP eCLIP31.17■■■□□ 2.588e-10■■■■■ 77.9
CCM2-201ENST00000258781 SEMA3FQ13275 785 aa31.17■■■□□ 2.58
CCM2-201ENST00000258781 PDIA5Q14554 519 aa31.17■■■□□ 2.58
CCM2-201ENST00000258781 XPO4Q9C0E2 1151 aaKnown RBP31.17■■■□□ 2.58
CCM2-201ENST00000258781 KBTBD4Q9NVX7 518 aa31.17■■■□□ 2.58
CCM2-201ENST00000258781 BLZF1Q9H2G9 400 aa31.16■■■□□ 2.58
CCM2-201ENST00000258781 RRAGCQ9HB90 399 aa31.16■■■□□ 2.58
CCM2-201ENST00000258781 FANCLQ9NW38 375 aa31.16■■■□□ 2.58
CCM2-201ENST00000258781 FOSP01100 380 aaPredicted RBP31.16■■■□□ 2.58
CCM2-201ENST00000258781 MOXD1Q6UVY6 613 aa31.16■■■□□ 2.58
CCM2-201ENST00000258781 FAM160B2Q86V87 743 aa31.16■■■□□ 2.58
CCM2-201ENST00000258781 CBFA2T2O43439 604 aa31.15■■■□□ 2.58
CCM2-201ENST00000258781 RPN1P04843 607 aaKnown RBP31.15■■■□□ 2.58
CCM2-201ENST00000258781 ATP1A3P13637 1013 aa31.15■■■□□ 2.58
CCM2-201ENST00000258781 PLCG1P19174 1290 aa31.15■■■□□ 2.58
CCM2-201ENST00000258781 MMTAG2Q9BU76 263 aaKnown RBP31.15■■■□□ 2.58
CCM2-201ENST00000258781 LRWD1Q9UFC0 647 aa31.15■■■□□ 2.58
CCM2-201ENST00000258781 CYP3A7-CYP3A51PA0A087WV96 503 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 PTPRAP18433 802 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 CYP3A7P24462 503 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 DGKZQ13574 1117 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 USH1GQ495M9 461 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 CALML4Q96GE6 196 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 IMPACTQ9P2X3 320 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 CLEC11AQ9Y240 323 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 CCDC144BQ3MJ40 725 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 MBOAT7Q96N66 472 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 FEZ1Q99689 392 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 RANBP17Q9H2T7 1088 aaKnown RBP31.14■■■□□ 2.58
CCM2-201ENST00000258781 NFE2L3Q9Y4A8 694 aa31.14■■■□□ 2.58
CCM2-201ENST00000258781 MAP1SQ66K74 1059 aaPredicted RBP31.13■■■□□ 2.57
CCM2-201ENST00000258781 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.13■■■□□ 2.57
CCM2-201ENST00000258781 CRYGNQ8WXF5 182 aa31.13■■■□□ 2.57
CCM2-201ENST00000258781 FEM1BQ9UK73 627 aa31.13■■■□□ 2.57
CCM2-201ENST00000258781 PPP1R3GB7ZBB8 358 aa31.12■■■□□ 2.57
CCM2-201ENST00000258781 CD44P16070 742 aaKnown RBP31.12■■■□□ 2.57
CCM2-201ENST00000258781 ZNF18P17022 549 aa31.12■■■□□ 2.57
CCM2-201ENST00000258781 NOL9Q5SY16 702 aaKnown RBP31.12■■■□□ 2.57
CCM2-201ENST00000258781 ZNF658Q5TYW1 1059 aaPredicted RBP31.12■■■□□ 2.57
CCM2-201ENST00000258781 PICK1Q9NRD5 415 aa31.12■■■□□ 2.57
CCM2-201ENST00000258781 PIK3CDO00329 1044 aa31.12■■■□□ 2.57
CCM2-201ENST00000258781 KCNB1Q14721 858 aa31.12■■■□□ 2.57
CCM2-201ENST00000258781 MED15Q96RN5 788 aa31.12■■■□□ 2.57
CCM2-201ENST00000258781 SYNRGQ9UMZ2 1314 aa31.11■■■□□ 2.57
CCM2-201ENST00000258781 DCAF8L1A6NGE4 600 aa31.11■■■□□ 2.57
CCM2-201ENST00000258781 PPP1R12BO60237 982 aaPredicted RBP31.11■■■□□ 2.57
CCM2-201ENST00000258781 SERPINC1P01008 464 aa31.11■■■□□ 2.57
CCM2-201ENST00000258781 VGLL4Q14135 290 aa31.11■■■□□ 2.57
CCM2-201ENST00000258781 LRRC15Q8TF66 581 aa31.11■■■□□ 2.57
CCM2-201ENST00000258781 HAS1Q92839 578 aa31.11■■■□□ 2.57
CCM2-201ENST00000258781 KIAA1683Q9H0B3 1180 aa31.11■■■□□ 2.57
CCM2-201ENST00000258781 OPLAHO14841 1288 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 MTMR2Q13614 643 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 SPATA1Q5VX52 437 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 MOB2Q70IA6 237 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 TRMT44Q8IYL2 757 aaKnown RBP31.1■■■□□ 2.57
CCM2-201ENST00000258781 PLIN2Q99541 437 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 NMRK2Q9NPI5 230 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 STK17AQ9UEE5 414 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 SPDYE3A6NKU9 549 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 UBASH3AP57075 661 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 GSDMDP57764 484 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 ARHGAP4P98171 946 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 SNCAIPQ9Y6H5 919 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 ZHX2Q9Y6X8 837 aa31.1■■■□□ 2.57
CCM2-201ENST00000258781 SMCHD1A6NHR9 2005 aa31.09■■■□□ 2.57
CCM2-201ENST00000258781 SREBF1P36956 1147 aa31.09■■■□□ 2.57
CCM2-201ENST00000258781 SPP2Q13103 211 aa31.09■■■□□ 2.57
CCM2-201ENST00000258781 DHX8Q14562 1220 aaKnown RBP31.09■■■□□ 2.57
CCM2-201ENST00000258781 ZNF526Q8TF50 670 aaPredicted RBP31.09■■■□□ 2.57
CCM2-201ENST00000258781 WDR18Q9BV38 432 aa31.09■■■□□ 2.57
CCM2-201ENST00000258781 MAP3K9P80192 1104 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 GRB10Q13322 594 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 KIAA1524Q8TCG1 905 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 KIFC2Q96AC6 838 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 P2RX7Q99572 595 aaKnown RBP31.08■■■□□ 2.57
CCM2-201ENST00000258781 KCNMB3Q9NPA1 279 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 PTPRFP10586 1907 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 TRAF5O00463 557 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 AMPD3Q01432 767 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 KRT79Q5XKE5 535 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 SMYD4Q8IYR2 804 aaPredicted RBP31.08■■■□□ 2.57
CCM2-201ENST00000258781 ZNF280CQ8ND82 737 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 LPAR1Q92633 364 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 C7orf25Q9BPX7 421 aa31.08■■■□□ 2.57
CCM2-201ENST00000258781 SLC26A4O43511 780 aa31.07■■■□□ 2.56
CCM2-201ENST00000258781 KLRC4O43908 158 aa31.07■■■□□ 2.56
CCM2-201ENST00000258781 MARCH6O60337 910 aa31.07■■■□□ 2.56
CCM2-201ENST00000258781 NF2P35240 595 aa31.07■■■□□ 2.56
CCM2-201ENST00000258781 CACTINQ8WUQ7 758 aaKnown RBP31.07■■■□□ 2.56
CCM2-201ENST00000258781 CDK5RAP3Q96JB5 506 aa31.07■■■□□ 2.56
CCM2-201ENST00000258781 PYCARDQ9ULZ3 195 aa31.07■■■□□ 2.56
CCM2-201ENST00000258781 KLHL10Q6JEL2 608 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 FILIP1Q7Z7B0 1213 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 PNMA5Q96PV4 448 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 GTPBP4Q9BZE4 634 aaKnown RBP31.06■■■□□ 2.56
CCM2-201ENST00000258781 AS3MTQ9HBK9 375 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 EMILIN3Q9NT22 766 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms