RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ABCC6O95255 1503 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 ATRNO75882 1429 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 ERICH4A6NGS2 130 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 AKR1B15C9JRZ8 316 aaPredicted RBP10.17□□□□□ -0.78
CKAP2-201ENST00000258607 PHACTR2O75167 634 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 USP8P40818 1118 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 KIAA1755Q5JYT7 1200 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 SV2BQ7L1I2 683 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 GPBP1Q86WP2 473 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 MYRIPQ8NFW9 859 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 DDX12PQ92771 950 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 RAVER2Q9HCJ3 691 aaKnown RBP10.17□□□□□ -0.78
CKAP2-201ENST00000258607 HDAC6Q9UBN7 1215 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 PPP2R2CQ9Y2T4 447 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 BTAF1O14981 1849 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 MYMKA6NI61 221 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 MDM2Q00987 491 aaPredicted RBP10.17□□□□□ -0.78
CKAP2-201ENST00000258607 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 DACT2Q5SW24 774 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 ANKRD40Q6AI12 368 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 PPP1R18Q6NYC8 613 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 ARHGAP27Q6ZUM4 889 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 VSTM4Q8IW00 320 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 ZNF710Q8N1W2 664 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 CCDC47Q96A33 483 aaKnown RBP10.17□□□□□ -0.78
CKAP2-201ENST00000258607 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 SMARCAL1Q9NZC9 954 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 DUSP10Q9Y6W6 482 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 ABCB11O95342 1321 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 TESPA1A2RU30 521 aaPredicted RBP10.16□□□□□ -0.78
CKAP2-201ENST00000258607 PPP1R3GB7ZBB8 358 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 FLOT1O75955 427 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 PRPF6O94906 941 aaKnown RBP10.16□□□□□ -0.78
CKAP2-201ENST00000258607 INPP5BP32019 993 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 MRPL12P52815 198 aaKnown RBP10.16□□□□□ -0.78
CKAP2-201ENST00000258607 GSDMDP57764 484 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 MKRN4PQ13434 485 aaPredicted RBP10.16□□□□□ -0.78
CKAP2-201ENST00000258607 CACNA2D4Q7Z3S7 1137 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 KRT25Q7Z3Z0 450 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 FBXO11Q86XK2 927 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 BHMT2Q9H2M3 363 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 MYH7P12883 1935 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 PPP4CP60510 307 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 KCNA1Q09470 495 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 RASA3Q14644 834 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 RAD9BQ6WBX8 426 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 PODNQ7Z5L7 613 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 BANK1Q8NDB2 785 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 CNKSR1Q969H4 720 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 GOLPH3Q9H4A6 298 aa10.16□□□□□ -0.78
CKAP2-201ENST00000258607 CHORDC1Q9UHD1 332 aaPredicted RBP10.16□□□□□ -0.78
CKAP2-201ENST00000258607 HARSP12081 509 aaKnown RBP10.15□□□□□ -0.78
CKAP2-201ENST00000258607 BMP3P12645 472 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 CASQ1P31415 396 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 COPB1P53618 953 aaKnown RBP10.15□□□□□ -0.78
CKAP2-201ENST00000258607 SPP2Q13103 211 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 RAPGEF1Q13905 1077 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 SPATA1Q5VX52 437 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 KANK3Q6NY19 840 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 LARP4BQ92615 738 aaKnown RBP10.15□□□□□ -0.78
CKAP2-201ENST00000258607 CNOT6LQ96LI5 555 aaKnown RBP10.15□□□□□ -0.78
CKAP2-201ENST00000258607 PPP1R16BQ96T49 567 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 ANO3Q9BYT9 981 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 ZBTB5O15062 677 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 BUB1O43683 1085 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 BAG6P46379 1132 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 CXCL9Q07325 125 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 FBXL16Q8N461 479 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 UBXN4Q92575 508 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 PCIF1Q9H4Z3 704 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 RABEP2Q9H5N1 569 aa10.15□□□□□ -0.78
CKAP2-201ENST00000258607 N4BP2Q86UW6 1770 aaPredicted RBP10.15□□□□□ -0.78
CKAP2-201ENST00000258607 TTC26A0AVF1 554 aa10.15□□□□□ -0.79
CKAP2-201ENST00000258607 SOX10P56693 466 aa10.15□□□□□ -0.79
CKAP2-201ENST00000258607 TC2NQ8N9U0 490 aa10.15□□□□□ -0.79
CKAP2-201ENST00000258607 CCDC150Q8NCX0 1101 aa10.15□□□□□ -0.79
CKAP2-201ENST00000258607 CAGE1Q8TC20 777 aa10.15□□□□□ -0.79
CKAP2-201ENST00000258607 ZNF526Q8TF50 670 aaPredicted RBP10.15□□□□□ -0.79
CKAP2-201ENST00000258607 TNFRSF25Q93038 417 aa10.15□□□□□ -0.79
CKAP2-201ENST00000258607 P2RX7Q99572 595 aaKnown RBP10.15□□□□□ -0.79
CKAP2-201ENST00000258607 TUBGCP2Q9BSJ2 902 aa10.15□□□□□ -0.79
CKAP2-201ENST00000258607 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
CKAP2-201ENST00000258607 GCNT3O95395 438 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 CYP2J2P51589 502 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 GYS2P54840 703 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 RRAGAQ7L523 313 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 JADE2Q9NQC1 790 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 CHD4Q14839 1912 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 PNMA6FA0A0J9YX94 578 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 IPO7O95373 1038 aaKnown RBP10.14□□□□□ -0.79
CKAP2-201ENST00000258607 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
CKAP2-201ENST00000258607 PDXDC2PQ6P474 469 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 PHLDB2Q86SQ0 1253 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 PAGR1Q9BTK6 254 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 TRIM9Q9C026 710 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 TNRC6CQ9HCJ0 1690 aaKnown RBP10.14□□□□□ -0.79
CKAP2-201ENST00000258607 AKR1B10O60218 316 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 CAVIN2O95810 425 aa10.14□□□□□ -0.79
CKAP2-201ENST00000258607 MYCNP04198 464 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms