RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 FAM170AA1A519 330 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 FLOT1O75955 427 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 GNA14O95837 355 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 FTCDO95954 541 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 FKBP3Q00688 224 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 MAP2K1Q02750 393 aaPredicted RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 NSUN4Q96CB9 384 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 SELENOSQ9BQE4 189 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 EPB41L5Q9HCM4 733 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 DDX25Q9UHL0 483 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 FCER1AP12319 257 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 COG1Q8WTW3 980 aa11.12□□□□□ -0.63
SEMA6A-201ENST00000257414 H3BQF6 201 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 ZNF185O15231 689 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 GRM4Q14833 912 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 PKN1Q16512 942 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 TRAPPC3LQ5T215 181 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 ANKRD40Q6AI12 368 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 DPP8Q6V1X1 898 aaPredicted RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 VGLL2Q8N8G2 317 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 TMOD2Q9NZR1 351 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 ZNF219Q9P2Y4 722 aaPredicted RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 RASAL2Q9UJF2 1139 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 ANAPC4Q9UJX5 808 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 RIC1Q4ADV7 1423 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 AFDNP55196 1824 aaKnown RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 ADAM9Q13443 819 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 TNIP1Q15025 636 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 HPS3Q969F9 1004 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 RIC8AQ9NPQ8 531 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 ARMCX3Q9UH62 379 aaPredicted RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 DNM3Q9UQ16 869 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 LRRC53A6NM62 1247 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 E7EVH7 732 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 CALUO43852 315 aaPredicted RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 NFRKBQ6P4R8 1299 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 CTNNBL1Q8WYA6 563 aaPredicted RBP11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 TMEM60Q9H2L4 133 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 PSTPIP2Q9H939 334 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 KIAA1024Q9UPX6 916 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 SAMM50Q9Y512 469 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 COL4A3BPQ9Y5P4 624 aa11.11□□□□□ -0.63
SEMA6A-201ENST00000257414 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 SRGNP10124 158 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 PRPHP41219 470 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 SLC1A4P43007 532 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 RUFY4Q6ZNE9 571 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 MSANTD4Q8NCY6 345 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 C8orf37Q96NL8 207 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 TRIM9Q9C026 710 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 ANKZF1Q9H8Y5 726 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 PPANQ9NQ55 473 aaKnown RBP11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 STIM2Q9P246 746 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 L1RE1Q9UN81 338 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 PLS1Q14651 629 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 CLEC4GQ6UXB4 293 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 ADGRA1Q86SQ6 560 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 RIN2Q8WYP3 895 aaPredicted RBP11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 PCDHA6Q9UN73 950 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 PCDHB13Q9Y5F0 798 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 PCDHA8Q9Y5H6 950 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 KDM3BQ7LBC6 1761 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 A0A0U1RQJ8 604 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 GCNT3O95395 438 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 XRCC5P13010 732 aaKnown RBP11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 LRRC63Q05C16 580 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 UNC13DQ70J99 1090 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 DAAM2Q86T65 1068 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 SRP68Q9UHB9 627 aaKnown RBP11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 MST1RQ04912 1400 aa11.1□□□□□ -0.63
SEMA6A-201ENST00000257414 POTEMA6NI47 508 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 PSMD14O00487 310 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 TRIM66O15016 1216 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 NCK2O43639 380 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 RHOBTB3O94955 611 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 CTNNA1P35221 906 aaKnown RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 CDK8P49336 464 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 STK4Q13043 487 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 KRT71Q3SY84 523 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 TMEM139Q8IV31 216 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 U2AF1L4Q8WU68 220 aaKnown RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 EHMT1Q9H9B1 1298 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 PSD3Q9NYI0 1048 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 UTP11Q9Y3A2 253 aaKnown RBP11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 LMO7Q8WWI1 1683 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 SLIT3O75094 1523 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 CHMP2AO43633 222 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 ARHGAP25P42331 645 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 GTF2IP78347 998 aa11.09□□□□□ -0.63
SEMA6A-201ENST00000257414 EMBQ6PCB8 327 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms