RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 BRD8Q9H0E9 1235 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 ZMAT5Q9UDW3 170 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 PCSK1NQ9UHG2 260 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CBFA2T3O75081 653 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 FSBPO95073 299 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 DDX5P17844 614 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 TSC22D1Q15714 1073 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 PPP6R3Q5H9R7 873 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 SPATA1Q5VX52 437 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 GALNT15Q8N3T1 639 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 TTC39CQ8N584 583 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 LRRC8CQ8TDW0 803 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 SEPT1Q8WYJ6 367 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 NAF1Q96HR8 494 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 ANKRD36BP1Q96IX9 119 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 NUP88Q99567 741 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 DACT1Q9NYF0 836 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 IFNKQ9P0W0 207 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 USP16Q9Y5T5 823 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 NPHP3Q7Z494 1330 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 A0A1W2PRG0 241 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 AKR1B10O60218 316 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 PTGS2P35354 604 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 SERPINB8P50452 374 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 AP2B1P63010 937 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 ARHGAP44Q17R89 818 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 BMP2KLQ5H9B9 411 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 CNTROBQ8N137 903 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 TCAIMQ8N3R3 496 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 DNAJC9Q8WXX5 260 aa7.35□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT86O43790 486 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 H2AFXP16104 143 aaPredicted RBP7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 C6orf118Q5T5N4 469 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 ALS2CLQ60I27 953 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 FAXDC2Q96IV6 333 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 NEUROD6Q96NK8 337 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 RBM42Q9BTD8 480 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 NKIRAS1Q9NYS0 192 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 CDC23Q9UJX2 597 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 ATP5JP18859 108 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 RALGDSQ12967 914 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 EIF4A2Q14240 407 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 CROCCP3Q8IVE0 287 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 ABLIM1O14639 778 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 TNNI2P48788 182 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 PDCLQ13371 301 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 GLE1Q53GS7 698 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 FYB2Q5VWT5 728 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC25Q86WR0 208 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 STAG2Q8N3U4 1231 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 TOR1AIP2Q8NFQ8 470 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 KLHL25Q9H0H3 589 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 PCDH18Q9HCL0 1135 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 MOSPD1Q9UJG1 213 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 MAP3K4Q9Y6R4 1608 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 ZMYM4Q5VZL5 1548 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 G3V3G9 751 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 PSMD14O00487 310 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 FCHO2Q0JRZ9 810 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 GRM1Q13255 1194 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 TRPC3Q13507 836 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 P3H1Q32P28 736 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 TMTC4Q5T4D3 741 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 DCAF8Q5TAQ9 597 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 C8orf74Q6P047 294 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 NLRP14Q86W24 1093 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 ANKRD13BQ86YJ7 626 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 NLRP7Q8WX94 980 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 MRPL46Q9H2W6 279 aaKnown RBP7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 C12orf4Q9NQ89 552 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 LMCD1Q9NZU5 365 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 IP6K2Q9UHH9 426 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 BLMP54132 1417 aaPredicted RBP7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 KDM2BQ8NHM5 1336 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 TRPM1Q7Z4N2 1603 aa7.34□□□□□ -1.23
PDGFRA-201ENST00000257290 PLEKHG3A1L390 1219 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 GOLGA8MH3BSY2 632 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 DAB1O75553 588 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 PSMA4P25789 261 aaKnown RBP7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 STX17P56962 302 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 DCTN2Q13561 401 aaKnown RBP7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 KPNB1Q14974 876 aaKnown RBP7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 GALNT17Q6IS24 598 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 LLGL2Q6P1M3 1020 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 BZW1Q7L1Q6 419 aaKnown RBP7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 UBLCP1Q8WVY7 318 aaPredicted RBP7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 SSH1Q8WYL5 1049 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 C19orf44Q9H6X5 657 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 TLK1Q9UKI8 766 aa7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 RNF17Q9BXT8 1623 aaKnown RBP7.34□□□□□ -1.24
PDGFRA-201ENST00000257290 RSPH10B2B2RC85 870 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 RSPH10BP0C881 870 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 HMGB2P26583 209 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 ASPHQ12797 758 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 C1orf115Q9H7X2 142 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 NCKAP5LQ9HCH0 1330 aa7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 XPO1O14980 1071 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 SURF6O75683 361 aaKnown RBP7.33□□□□□ -1.24
PDGFRA-201ENST00000257290 LDHCP07864 332 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms