RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 DNAJC2Q99543 621 aaKnown RBP14.29□□□□□ -0.12
RFPL3-201ENST00000249007 CYP39A1Q9NYL5 469 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
RFPL3-201ENST00000249007 KPNA6O60684 536 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 PARNO95453 639 aaKnown RBP14.28□□□□□ -0.12
RFPL3-201ENST00000249007 ALAS1P13196 640 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 RASA1P20936 1047 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 CHMP4BP1P59074 171 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 IKBKEQ14164 716 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 TKFCQ3LXA3 575 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 TRIM67Q6ZTA4 783 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 MORC4Q8TE76 937 aa14.28□□□□□ -0.12
RFPL3-201ENST00000249007 NSUN3Q9H649 340 aaKnown RBP14.28□□□□□ -0.12
RFPL3-201ENST00000249007 NCOR2Q9Y618 2525 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 IPO8O15397 1037 aaKnown RBP14.27□□□□□ -0.12
RFPL3-201ENST00000249007 NBNO60934 754 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 CXCL10P02778 98 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 STAT2P52630 851 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 TCTN1Q2MV58 587 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 SLFNL1Q499Z3 407 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 EPC2Q52LR7 807 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 ERMP1Q7Z2K6 904 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 RPAP2Q8IXW5 612 aaPredicted RBP14.27□□□□□ -0.12
RFPL3-201ENST00000249007 TRMT2AQ8IZ69 625 aaKnown RBP14.27□□□□□ -0.12
RFPL3-201ENST00000249007 CLUAP1Q96AJ1 413 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 PURBQ96QR8 312 aaKnown RBP14.27□□□□□ -0.12
RFPL3-201ENST00000249007 MKNK2Q9HBH9 465 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 TNNQ9UQP3 1299 aa14.27□□□□□ -0.12
RFPL3-201ENST00000249007 ZBED9Q6R2W3 1325 aa14.27□□□□□ -0.13
RFPL3-201ENST00000249007 TMEM232C9JQI7 657 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 BMP3P12645 472 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 LTBRP36941 435 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 IKQ13123 557 aaPredicted RBP14.26□□□□□ -0.13
RFPL3-201ENST00000249007 CLUL1Q15846 466 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 NSMFQ6X4W1 530 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
RFPL3-201ENST00000249007 FBXL6Q8N531 539 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 GMCL1P1Q8NEA9 526 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 ATOH1Q92858 354 aaPredicted RBP14.26□□□□□ -0.13
RFPL3-201ENST00000249007 SAMD11Q96NU1 681 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 CTAGE1Q96RT6 745 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 IRF2BPLQ9H1B7 796 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 C1orf115Q9H7X2 142 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 ARPP21Q9UBL0 812 aaPredicted RBP14.26□□□□□ -0.13
RFPL3-201ENST00000249007 SYNPO2Q9UMS6 1093 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 SLC4A4Q9Y6R1 1079 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 LCTP09848 1927 aa14.26□□□□□ -0.13
RFPL3-201ENST00000249007 A6NJR5 290 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 H3BNC9 293 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 NCK2O43639 380 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 ADD2P35612 726 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 GPM6BQ13491 265 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 MUM1L1Q5H9M0 696 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 MICAL3Q7RTP6 2002 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 RPAINQ86UA6 219 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 KMT2EQ8IZD2 1858 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 STK11IPQ8N1F8 1099 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 MKL1Q969V6 931 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 ADD3Q9UEY8 706 aaKnown RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 EP300Q09472 2414 aaPredicted RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 ZNF292O60281 2723 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 RBM47A0AV96 593 aaKnown RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 MBTPS2O43462 519 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 NEFLP07196 543 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 CKBP12277 381 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 HTRA4P83105 476 aaPredicted RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 RBL2Q08999 1139 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 SLFN13Q68D06 897 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 GDF6Q6KF10 455 aaPredicted RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 ERC1Q8IUD2 1116 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 CHURC1Q8WUH1 139 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 DHX38Q92620 1227 aaKnown RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 FRAT1Q92837 279 aaPredicted RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 CEP95Q96GE4 821 aa14.25□□□□□ -0.13
RFPL3-201ENST00000249007 ALG13Q9NP73 1137 aaKnown RBP14.25□□□□□ -0.13
RFPL3-201ENST00000249007 IGKV6D-41A0A0C4DH26 115 aa14.24□□□□□ -0.13
RFPL3-201ENST00000249007 STXBP3O00186 592 aa14.24□□□□□ -0.13
RFPL3-201ENST00000249007 NKRFO15226 690 aaKnown RBP eCLIP14.24□□□□□ -0.13
RFPL3-201ENST00000249007 TTLL1O95922 423 aa14.24□□□□□ -0.13
RFPL3-201ENST00000249007 ALDH5A1P51649 535 aaPredicted RBP14.24□□□□□ -0.13
RFPL3-201ENST00000249007 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.24□□□□□ -0.13
RFPL3-201ENST00000249007 FAM160B2Q86V87 743 aa14.24□□□□□ -0.13
RFPL3-201ENST00000249007 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
RFPL3-201ENST00000249007 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.24□□□□□ -0.13
RFPL3-201ENST00000249007 MTMR4Q9NYA4 1195 aa14.24□□□□□ -0.13
RFPL3-201ENST00000249007 DMXL1Q9Y485 3027 aa14.23□□□□□ -0.13
RFPL3-201ENST00000249007 AMHP03971 560 aa14.23□□□□□ -0.13
RFPL3-201ENST00000249007 DLX2Q07687 328 aaPredicted RBP14.23□□□□□ -0.13
RFPL3-201ENST00000249007 SMAD4Q13485 552 aaKnown RBP14.23□□□□□ -0.13
RFPL3-201ENST00000249007 CTC1Q2NKJ3 1217 aa14.23□□□□□ -0.13
RFPL3-201ENST00000249007 SESTD1Q86VW0 696 aa14.23□□□□□ -0.13
RFPL3-201ENST00000249007 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
RFPL3-201ENST00000249007 IL1RAPL2Q9NP60 686 aa14.23□□□□□ -0.13
RFPL3-201ENST00000249007 EXOC6BQ9Y2D4 811 aa14.23□□□□□ -0.13
RFPL3-201ENST00000249007 DNAH14Q0VDD8 3507 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
RFPL3-201ENST00000249007 VCPP55072 806 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms