RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PHF24Q9UPV7 400 aa28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 GNEQ9Y223 722 aaKnown RBP28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 DDX49Q9Y6V7 483 aaKnown RBP28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 CNTNAP5Q8WYK1 1306 aa28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 MKI67P46013 3256 aaKnown RBP28.1■■■□□ 2.09
SDF2L1-201ENST00000248958 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.09■■■□□ 2.09
SDF2L1-201ENST00000248958 MOXD2PA6NHM9 499 aa28.09■■■□□ 2.09
SDF2L1-201ENST00000248958 STXBP2Q15833 593 aa28.09■■■□□ 2.09
SDF2L1-201ENST00000248958 CUL5Q93034 780 aa28.09■■■□□ 2.09
SDF2L1-201ENST00000248958 PXMP2Q9NR77 195 aa28.09■■■□□ 2.09
SDF2L1-201ENST00000248958 PDGFCQ9NRA1 345 aa28.09■■■□□ 2.09
SDF2L1-201ENST00000248958 ADCY6O43306 1168 aa28.08■■■□□ 2.09
SDF2L1-201ENST00000248958 C6orf222P0C671 652 aaPredicted RBP28.08■■■□□ 2.09
SDF2L1-201ENST00000248958 SMPD1P17405 629 aa28.08■■■□□ 2.09
SDF2L1-201ENST00000248958 DUSP28Q4G0W2 176 aa28.08■■■□□ 2.09
SDF2L1-201ENST00000248958 SCFD2Q8WU76 684 aa28.08■■■□□ 2.09
SDF2L1-201ENST00000248958 FAM217BQ9NTX9 383 aaPredicted RBP28.08■■■□□ 2.09
SDF2L1-201ENST00000248958 KIAA1217Q5T5P2 1943 aa28.08■■■□□ 2.09
SDF2L1-201ENST00000248958 hCG_1984214I3L0E3 225 aa28.07■■■□□ 2.08
SDF2L1-201ENST00000248958 NKRFO15226 690 aaKnown RBP eCLIP28.07■■■□□ 2.08
SDF2L1-201ENST00000248958 CDC27P30260 824 aa28.07■■■□□ 2.08
SDF2L1-201ENST00000248958 TLK2Q86UE8 772 aa28.07■■■□□ 2.08
SDF2L1-201ENST00000248958 ZNF713Q8N859 430 aaPredicted RBP28.07■■■□□ 2.08
SDF2L1-201ENST00000248958 WDR11Q9BZH6 1224 aa28.07■■■□□ 2.08
SDF2L1-201ENST00000248958 AP5M1Q9H0R1 490 aa28.07■■■□□ 2.08
SDF2L1-201ENST00000248958 PIK3CDO00329 1044 aa28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 EIF3JO75822 258 aaKnown RBP28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 NR3C2P08235 984 aa28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 EIF2AK2P19525 551 aaKnown RBP28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 HOXA13P31271 388 aaPredicted RBP28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 FUT2Q10981 343 aa28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 TEX2Q8IWB9 1127 aa28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 IL17RAQ96F46 866 aa28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 PDRG1Q9NUG6 133 aa28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 RBM27Q9P2N5 1060 aaKnown RBP28.06■■■□□ 2.08
SDF2L1-201ENST00000248958 TOB2Q14106 344 aaPredicted RBP28.05■■■□□ 2.08
SDF2L1-201ENST00000248958 TTLL4Q14679 1199 aa28.05■■■□□ 2.08
SDF2L1-201ENST00000248958 CCSAPQ6IQ19 270 aaPredicted RBP28.05■■■□□ 2.08
SDF2L1-201ENST00000248958 SLC39A5Q6ZMH5 540 aa28.05■■■□□ 2.08
SDF2L1-201ENST00000248958 SMARCC2Q8TAQ2 1214 aa28.05■■■□□ 2.08
SDF2L1-201ENST00000248958 PDCD2LQ9BRP1 358 aa28.05■■■□□ 2.08
SDF2L1-201ENST00000248958 UPF3BQ9BZI7 483 aaKnown RBP28.05■■■□□ 2.08
SDF2L1-201ENST00000248958 ZEB2O60315 1214 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 ADD1P35611 737 aaKnown RBP28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 ACLYP53396 1101 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 KCNA10Q16322 511 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 LRRC26Q2I0M4 334 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 GNASQ5JWF2 1037 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 C1orf53Q5VUE5 145 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 PPP1R18Q6NYC8 613 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 PSTPIP2Q9H939 334 aa28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 V9GY48 417 aaPredicted RBP28.04■■■□□ 2.08
SDF2L1-201ENST00000248958 DYNC1LI2O43237 492 aaPredicted RBP28.03■■■□□ 2.08
SDF2L1-201ENST00000248958 PDIA3P30101 505 aaKnown RBP28.03■■■□□ 2.08
SDF2L1-201ENST00000248958 PGM5Q15124 567 aa28.03■■■□□ 2.08
SDF2L1-201ENST00000248958 HEATR3Q7Z4Q2 680 aa28.03■■■□□ 2.08
SDF2L1-201ENST00000248958 FCHSD1Q86WN1 690 aa28.03■■■□□ 2.08
SDF2L1-201ENST00000248958 ZNF274Q96GC6 653 aaPredicted RBP28.03■■■□□ 2.08
SDF2L1-201ENST00000248958 ALDH8A1Q9H2A2 487 aaPredicted RBP28.03■■■□□ 2.08
SDF2L1-201ENST00000248958 FRMPD4Q14CM0 1322 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 A0A1W2PQ45 241 aaPredicted RBP28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 A0A1W2PQY0 241 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 hCG_1642624A0A1W2PR95 340 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 MYADML2A6NDP7 307 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 H0YGN5 161 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 ATN1P54259 1190 aaPredicted RBP28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 SNX17Q15036 470 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 VSIG10LQ86VR7 867 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 C7orf61Q8IZ16 206 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 FERMT2Q96AC1 680 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 GLT1D1Q96MS3 346 aa28.02■■■□□ 2.08
SDF2L1-201ENST00000248958 MEIS2O14770 477 aa28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 CTAGE5O15320 804 aa28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 ASGR1P07306 291 aa28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 TXNP10599 105 aaKnown RBP28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 CCND2P30279 289 aa28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 FSCN1Q16658 493 aaKnown RBP28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 KCNV1Q6PIU1 500 aa28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 STARD7Q9NQZ5 370 aa28.01■■■□□ 2.07
SDF2L1-201ENST00000248958 ELP1O95163 1332 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 STAM2O75886 525 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 CABYRO75952 493 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 MYCLP12524 364 aaPredicted RBP28■■■□□ 2.07
SDF2L1-201ENST00000248958 AKAP17AQ02040 695 aaKnown RBP28■■■□□ 2.07
SDF2L1-201ENST00000248958 ANKRD1Q15327 319 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 BRDTQ58F21 947 aaPredicted RBP28■■■□□ 2.07
SDF2L1-201ENST00000248958 WWC2Q6AWC2 1192 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 USP17L6PQ6QN14 398 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 SEPT14Q6ZU15 432 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 GPKOWQ92917 476 aaPredicted RBP eCLIP28■■■□□ 2.075e-7■■■■□ 26.2
SDF2L1-201ENST00000248958 GLT8D2Q9H1C3 349 aa28■■■□□ 2.07
SDF2L1-201ENST00000248958 PRPF3O43395 683 aaKnown RBP27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 SEC24BO95487 1268 aa27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 CPT1AP50416 773 aa27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 NAPAP54920 295 aa27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 RTP1P59025 263 aa27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 PFKFB3Q16875 520 aaPredicted RBP27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 C8orf34Q49A92 452 aa27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 OR6J1Q8NGC5 347 aa27.99■■■□□ 2.07
SDF2L1-201ENST00000248958 RNF26Q9BY78 433 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms