RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZBED6P86452 979 aa28.48■■■□□ 2.15
RAB40C-201ENST00000248139 SAR1BQ9Y6B6 198 aa28.48■■■□□ 2.15
RAB40C-201ENST00000248139 GYS1P13807 737 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 AMPD3Q01432 767 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 CNNM4Q6P4Q7 775 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 SNX29Q8TEQ0 813 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 NOC3LQ8WTT2 800 aaKnown RBP28.47■■■□□ 2.15
RAB40C-201ENST00000248139 LARP4BQ92615 738 aaKnown RBP28.47■■■□□ 2.15
RAB40C-201ENST00000248139 TRERF1Q96PN7 1200 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 MMRN2Q9H8L6 949 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 ADCY7P51828 1080 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 C2CD5Q86YS7 1000 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 TBC1D7Q9P0N9 293 aa28.47■■■□□ 2.15
RAB40C-201ENST00000248139 CYLC1P35663 651 aaPredicted RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 HNRNPH2P55795 449 aaKnown RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 TUBB2AQ13885 445 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 HDXQ7Z353 690 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 HNRNPLLQ8WVV9 542 aaKnown RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 TUBB2BQ9BVA1 445 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 VPS18Q9P253 973 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 ADAM21Q9UKJ8 722 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 MRPS25P82663 173 aaKnown RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 KCTD1Q719H9 257 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 KANSL2Q9H9L4 492 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 PDE2AO00408 941 aaPredicted RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 KRT83P78385 493 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 SHROOM1Q2M3G4 852 aaPredicted RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 C15orf52Q6ZUT6 534 aaKnown RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 GSPT2Q8IYD1 628 aaKnown RBP28.46■■■□□ 2.15
RAB40C-201ENST00000248139 MAGEF1Q9HAY2 307 aa28.46■■■□□ 2.15
RAB40C-201ENST00000248139 LRRIQ3A6PVS8 624 aaPredicted RBP28.45■■■□□ 2.14
RAB40C-201ENST00000248139 SSBP05455 408 aaKnown RBP eCLIP28.45■■■□□ 2.14
RAB40C-201ENST00000248139 CACNB1Q02641 598 aaPredicted RBP28.45■■■□□ 2.14
RAB40C-201ENST00000248139 CASP8Q14790 479 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 CENPPQ6IPU0 288 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 DDX12PQ92771 950 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 PSMB7Q99436 277 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 KRT86O43790 486 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 PLCG2P16885 1265 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 RAD51AP2Q09MP3 1159 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 CRY2Q49AN0 593 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 FKBP15Q5T1M5 1219 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 ADGRF4Q8IZF3 695 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 JMJD4Q9H9V9 463 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 MLXIPQ9HAP2 919 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 JADE2Q9NQC1 790 aa28.45■■■□□ 2.14
RAB40C-201ENST00000248139 MPHOSPH10O00566 681 aaKnown RBP28.44■■■□□ 2.14
RAB40C-201ENST00000248139 ERLIN1O75477 346 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 ANKRD13CQ8N6S4 541 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 CCDC42Q96M95 316 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 NDST4Q9H3R1 872 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 ARHGAP20Q9P2F6 1191 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 IPO7O95373 1038 aaKnown RBP28.44■■■□□ 2.14
RAB40C-201ENST00000248139 CCDC96Q2M329 555 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 FAM114A1Q8IWE2 563 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 ZSCAN29Q8IWY8 852 aaPredicted RBP28.44■■■□□ 2.14
RAB40C-201ENST00000248139 CERS5Q8N5B7 392 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 RBM17Q96I25 401 aaKnown RBP28.44■■■□□ 2.14
RAB40C-201ENST00000248139 FGFBP2Q9BYJ0 223 aa28.44■■■□□ 2.14
RAB40C-201ENST00000248139 GAKO14976 1311 aa28.43■■■□□ 2.14
RAB40C-201ENST00000248139 FAM196BA6NMK8 535 aa28.43■■■□□ 2.14
RAB40C-201ENST00000248139 POTEB2H3BUK9 544 aa28.43■■■□□ 2.14
RAB40C-201ENST00000248139 DOK7Q18PE1 504 aa28.43■■■□□ 2.14
RAB40C-201ENST00000248139 VWA3BQ502W6 1294 aa28.43■■■□□ 2.14
RAB40C-201ENST00000248139 NUP58Q9BVL2 599 aa28.43■■■□□ 2.14
RAB40C-201ENST00000248139 LMAN1P49257 510 aa28.43■■■□□ 2.14
RAB40C-201ENST00000248139 EIF3CLB5ME19 914 aaKnown RBP28.42■■■□□ 2.14
RAB40C-201ENST00000248139 USP17L10C9JJH3 530 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 UNC13DQ70J99 1090 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 CCDC102AQ96A19 550 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 ERGIC2Q96RQ1 377 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 EIF3CQ99613 913 aaKnown RBP28.42■■■□□ 2.14
RAB40C-201ENST00000248139 FAN1Q9Y2M0 1017 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 CAPN6Q9Y6Q1 641 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 NT5C2P49902 561 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 APBA1Q02410 837 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 CAGE1Q8TC20 777 aa28.42■■■□□ 2.14
RAB40C-201ENST00000248139 LTBP4Q8N2S1 1624 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 DDR1Q08345 913 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 TMEM266Q2M3C6 531 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 RRAGAQ7L523 313 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 RAD54LQ92698 747 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 FAM163AQ96GL9 167 aaPredicted RBP28.41■■■□□ 2.14
RAB40C-201ENST00000248139 TANGO6Q9C0B7 1094 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 SMARCAL1Q9NZC9 954 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 SIK3Q9Y2K2 1263 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 CCDC66A2RUB6 948 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 MARCH6O60337 910 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 PAPD7Q5XG87 772 aaKnown RBP28.41■■■□□ 2.14
RAB40C-201ENST00000248139 KRT79Q5XKE5 535 aa28.41■■■□□ 2.14
RAB40C-201ENST00000248139 NPHP3-ACAD11A0A0J9YXS1 232 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 EIF4A3P38919 411 aaKnown RBP28.4■■■□□ 2.14
RAB40C-201ENST00000248139 GABPAQ06546 454 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 C2orf54Q08AI8 447 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 HAS1Q92839 578 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 TAF1LQ8IZX4 1826 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 ESYT2A0FGR8 921 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 TOM1O60784 492 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 MOCS3O95396 460 aa28.4■■■□□ 2.14
RAB40C-201ENST00000248139 NOVP48745 357 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms