RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 MYH7BA7E2Y1 1941 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 PVALEFA0A1B0GWK0 134 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 GH2P01242 217 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 GYPCP04921 128 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 USP11P51784 963 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
DDX49-201ENST00000247003 TOGARAM2Q6ZUX3 1019 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 UNC13DQ70J99 1090 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 ZNF710Q8N1W2 664 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 ANKRD7Q92527 254 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 RAD54LQ92698 747 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 PRMT6Q96LA8 375 aaPredicted RBP16.92■□□□□ 0.3
DDX49-201ENST00000247003 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 NT5C3AQ9H0P0 336 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
DDX49-201ENST00000247003 ARHGEF10LQ9HCE6 1279 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 PCDHA12Q9UN75 941 aa16.92■□□□□ 0.3
DDX49-201ENST00000247003 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
DDX49-201ENST00000247003 LGALS16A8MUM7 142 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 NDUFB10O96000 172 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 BMP3P12645 472 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
DDX49-201ENST00000247003 MCM6Q14566 821 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 TTI2Q6NXR4 508 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 FBXO11Q86XK2 927 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 SLC26A4O43511 780 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 PMS1P54277 932 aaKnown RBP16.91■□□□□ 0.3
DDX49-201ENST00000247003 TRAF1Q13077 416 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 DLGAP5Q15398 846 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 SHROOM1Q2M3G4 852 aaPredicted RBP16.91■□□□□ 0.3
DDX49-201ENST00000247003 MOXD1Q6UVY6 613 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 PNMA5Q96PV4 448 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 PSMD1Q99460 953 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 BLOC1S4Q9NUP1 217 aa16.91■□□□□ 0.3
DDX49-201ENST00000247003 A0A1W2PQC6 194 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 SOWAHDA6NJG2 315 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 SPDYE3A6NKU9 549 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L15C9J2P7 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L13C9JLJ4 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L11C9JVI0 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L18D6R9N7 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L22D6RA61 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 PRKCSHP14314 528 aaPredicted RBP16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 TSR1Q2NL82 804 aaKnown RBP16.9■□□□□ 0.3
DDX49-201ENST00000247003 TMEM119Q4V9L6 283 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 USP17L6PQ6QN14 398 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 TMTC1Q8IUR5 882 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 L2HGDHQ9H9P8 463 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
DDX49-201ENST00000247003 ABHD10Q9NUJ1 306 aa16.9■□□□□ 0.3
DDX49-201ENST00000247003 ZNF215Q9UL58 517 aaPredicted RBP16.9■□□□□ 0.3
DDX49-201ENST00000247003 TCP10L2B9ZVM9 353 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 FGFR1OPO95684 399 aaKnown RBP16.89■□□□□ 0.29
DDX49-201ENST00000247003 FOSP01100 380 aaPredicted RBP16.89■□□□□ 0.29
DDX49-201ENST00000247003 CASQ1P31415 396 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 DNM2P50570 870 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.29
DDX49-201ENST00000247003 STK4Q13043 487 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 MB21D1Q8N884 522 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 DESI2Q9BSY9 194 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 GOPCQ9HD26 462 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
DDX49-201ENST00000247003 MYMKA6NI61 221 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 EDIL3O43854 480 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 FCER1AP12319 257 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 IDEP14735 1019 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 MTIF2P46199 727 aaKnown RBP16.89■□□□□ 0.29
DDX49-201ENST00000247003 GNG11P61952 73 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 PSMD2Q13200 908 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 USH1GQ495M9 461 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 HAUS3Q68CZ6 603 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 TRIM65Q6PJ69 517 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 CYP26C1Q6V0L0 522 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 DYMQ7RTS9 669 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 HAS1Q92839 578 aa16.89■□□□□ 0.29
DDX49-201ENST00000247003 CNOT6LQ96LI5 555 aaKnown RBP16.89■□□□□ 0.29
DDX49-201ENST00000247003 CLRN2A0PK11 232 aa16.88■□□□□ 0.29
DDX49-201ENST00000247003 IRF2BP1Q8IU81 584 aa16.88■□□□□ 0.29
DDX49-201ENST00000247003 TSG101Q99816 390 aa16.88■□□□□ 0.29
DDX49-201ENST00000247003 TUBGCP2Q9BSJ2 902 aa16.88■□□□□ 0.29
DDX49-201ENST00000247003 SLC39A2Q9NP94 309 aa16.88■□□□□ 0.29
DDX49-201ENST00000247003 STK24Q9Y6E0 443 aa16.88■□□□□ 0.29
DDX49-201ENST00000247003 CYP3A7-CYP3A51PA0A087WV96 503 aa16.87■□□□□ 0.29
DDX49-201ENST00000247003 PSMD14O00487 310 aa16.87■□□□□ 0.29
DDX49-201ENST00000247003 RAD17O75943 681 aa16.87■□□□□ 0.29
DDX49-201ENST00000247003 URI1O94763 535 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms