RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 CNKSR2Q8WXI2 1034 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 TBC1D5Q92609 795 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 ERCC4Q92889 916 aaPredicted RBP21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 HOMER2Q9NSB8 354 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 MAP3K20Q9NYL2 800 aaKnown RBP21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 TRAF5O00463 557 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 IRF6O14896 467 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 ACTN4O43707 911 aaKnown RBP21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 FXR2P51116 673 aaKnown RBP eCLIP21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 FSTL1Q12841 308 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 PNOCQ13519 176 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 POSTNQ15063 836 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 SLFN12Q8IYM2 578 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 PROCA1Q8NCQ7 364 aaPredicted RBP21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 TRERF1Q96PN7 1200 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 CCSER1Q9C0I3 900 aa21.15■□□□□ 0.98
TNFSF9-201ENST00000245817 CYP3A4P08684 503 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 CDC25AP30304 524 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 PPIL2Q13356 520 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 PDIA5Q14554 519 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 UVSSAQ2YD98 709 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 RRAGBQ5VZM2 374 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 FAM200AQ8TCP9 573 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 P2RX7Q99572 595 aaKnown RBP21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 NAT10Q9H0A0 1025 aaKnown RBP21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 LRWD1Q9UFC0 647 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 RABGAP1Q9Y3P9 1069 aa21.14■□□□□ 0.97
TNFSF9-201ENST00000245817 A0A087X0B3 334 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 UNCXA6NJT0 531 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 STAT6P42226 847 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 HSD17B4P51659 736 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 Q4G0T1 1027 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 PRR16Q569H4 304 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 CABP7Q86V35 215 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 CRYGNQ8WXF5 182 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 CLEC4DQ8WXI8 215 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 OPTNQ96CV9 577 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 SLC10A4Q96EP9 437 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 TTC12Q9H892 705 aaPredicted RBP21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 DISC1Q9NRI5 854 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 PCDHA12Q9UN75 941 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 ADAMTS5Q9UNA0 930 aa21.13■□□□□ 0.97
TNFSF9-201ENST00000245817 A0A0G2JLL6 359 aaPredicted RBP21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 NFIBO00712 420 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 SMC2O95347 1197 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 CIITAP33076 1130 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 KARSQ15046 597 aaKnown RBP21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 SNRNP48Q6IEG0 339 aaKnown RBP21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 PRRT2Q7Z6L0 340 aaPredicted RBP21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 IGSF22Q8N9C0 903 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 CALML4Q96GE6 196 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 MBOAT7Q96N66 472 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 DNAJC25Q9H1X3 360 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 PHIPQ8WWQ0 1821 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 TBX3O15119 743 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 ZNF165P49910 485 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 IRX3P78415 501 aaPredicted RBP21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 MDM2Q00987 491 aaPredicted RBP21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 FMR1Q06787 632 aaKnown RBP eCLIP21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 LDLRAD1Q5T700 205 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 SMARCE1Q969G3 411 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 TUBE1Q9UJT0 475 aa21.12■□□□□ 0.97
TNFSF9-201ENST00000245817 SPDYE16A6NNV3 312 aaPredicted RBP21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 PP2D1A8MPX8 630 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 BIN1O00499 593 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 ATP2A1O14983 1001 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 AFMP43652 599 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 NLRP12P59046 1061 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 PLS1Q14651 629 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 TKFCQ3LXA3 575 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 MUM1L1Q5H9M0 696 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 TREML2Q5T2D2 321 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 KRT79Q5XKE5 535 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 FASTKD5Q7L8L6 764 aaKnown RBP21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 HAS1Q92839 578 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 PAGE5Q96GU1 130 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 WNK4Q96J92 1243 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 CDK5RAP3Q96JB5 506 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 TEX13BQ9BXU2 312 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 RNF146Q9NTX7 359 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 KCNH4Q9UQ05 1017 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 PCDHA5Q9Y5H7 936 aa21.11■□□□□ 0.97
TNFSF9-201ENST00000245817 CELF2O95319 508 aaKnown RBP21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 HOXA7P31268 230 aaPredicted RBP21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 FKBP1BP68106 108 aa21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 PABPC4Q13310 644 aaKnown RBP eCLIP21.1■□□□□ 0.971e-6■■■■□ 21.5
TNFSF9-201ENST00000245817 RNF207Q6ZRF8 634 aa21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 REPS2Q8NFH8 660 aa21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 FAM20AQ96MK3 541 aa21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 KCNMB3Q9NPA1 279 aa21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 PASKQ96RG2 1323 aa21.1■□□□□ 0.97
TNFSF9-201ENST00000245817 FOXN1O15353 648 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 STAT3P40763 770 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 GHRHRQ02643 423 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 TMEM132BQ14DG7 1078 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 E2F4Q16254 413 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 NSMFQ6X4W1 530 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 MB21D1Q8N884 522 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 CUEDC2Q9H467 287 aa21.09■□□□□ 0.97
TNFSF9-201ENST00000245817 FAM86B1E9PN63 330 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms