RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 H3BQF6 201 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
HIF3A-202ENST00000244303 CYLC1P35663 651 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-202ENST00000244303 ZBED6P86452 979 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 ORC2Q13416 577 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-202ENST00000244303 MCM6Q14566 821 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 CALCRLQ16602 461 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 SV2BQ7L1I2 683 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 ZSCAN29Q8IWY8 852 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-202ENST00000244303 JAKMIP2Q96AA8 810 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 MTMR9Q96QG7 549 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 BLOC1S4Q9NUP1 217 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
HIF3A-202ENST00000244303 LRRC37AA6NMS7 1700 aa16.04■□□□□ 0.16
HIF3A-202ENST00000244303 RCCD1A6NED2 376 aa16.04■□□□□ 0.16
HIF3A-202ENST00000244303 SLC37A4O43826 429 aa16.04■□□□□ 0.16
HIF3A-202ENST00000244303 COBLL1Q53SF7 1204 aa16.04■□□□□ 0.16
HIF3A-202ENST00000244303 HDXQ7Z353 690 aa16.04■□□□□ 0.16
HIF3A-202ENST00000244303 LRRC47Q8N1G4 583 aaKnown RBP16.04■□□□□ 0.16
HIF3A-202ENST00000244303 L1RE1Q9UN81 338 aa16.04■□□□□ 0.16
HIF3A-202ENST00000244303 MYMKA6NI61 221 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 KRT86O43790 486 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 TDP2O95551 362 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 ZNF662Q6ZS27 426 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
HIF3A-202ENST00000244303 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 PNMA5Q96PV4 448 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 ERGIC2Q96RQ1 377 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 LACRTQ9GZZ8 138 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 ANKRD31Q8N7Z5 1873 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 MYH7BA7E2Y1 1941 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 EIF3CLB5ME19 914 aaKnown RBP16.03■□□□□ 0.16
HIF3A-202ENST00000244303 EDIL3O43854 480 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 NPR1P16066 1061 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 ADCY7P51828 1080 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 GYS2P54840 703 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 EIF6P56537 245 aaKnown RBP16.03■□□□□ 0.16
HIF3A-202ENST00000244303 PICALMQ13492 652 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 CENPPQ6IPU0 288 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 DYMQ7RTS9 669 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 LARP4BQ92615 738 aaKnown RBP16.03■□□□□ 0.16
HIF3A-202ENST00000244303 EIF3CQ99613 913 aaKnown RBP16.03■□□□□ 0.16
HIF3A-202ENST00000244303 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
HIF3A-202ENST00000244303 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 MTMR4Q9NYA4 1195 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 SAR1BQ9Y6B6 198 aa16.03■□□□□ 0.16
HIF3A-202ENST00000244303 POTEMA6NI47 508 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
HIF3A-202ENST00000244303 FIGNQ5HY92 759 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 FKBP15Q5T1M5 1219 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 PAPD7Q5XG87 772 aaKnown RBP16.02■□□□□ 0.16
HIF3A-202ENST00000244303 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
HIF3A-202ENST00000244303 CDK5RAP3Q96JB5 506 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 STK17AQ9UEE5 414 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 PLIN4Q96Q06 1357 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 MYH4Q9Y623 1939 aa16.02■□□□□ 0.16
HIF3A-202ENST00000244303 A0A1W2PQJ5 194 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 F8W031 263 aaPredicted RBP16.02■□□□□ 0.15
HIF3A-202ENST00000244303 IPO7O95373 1038 aaKnown RBP16.02■□□□□ 0.15
HIF3A-202ENST00000244303 IRX5P78411 483 aaPredicted RBP16.02■□□□□ 0.15
HIF3A-202ENST00000244303 CYP27A1Q02318 531 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 TMEM266Q2M3C6 531 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 UNC13DQ70J99 1090 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 CERS5Q8N5B7 392 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 EHBP1Q8NDI1 1231 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 NEK11Q8NG66 645 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 ZBTB9Q96C00 473 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 MMS19Q96T76 1030 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 SUGT1Q9Y2Z0 365 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 DUSP10Q9Y6W6 482 aa16.02■□□□□ 0.15
HIF3A-202ENST00000244303 PLSCR1O15162 318 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 AKR1B1P15121 316 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 HNRNPH2P55795 449 aaKnown RBP16.01■□□□□ 0.15
HIF3A-202ENST00000244303 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 ASPRV1Q53RT3 343 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-202ENST00000244303 ARFGEF1Q9Y6D6 1849 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 MYH10P35580 1976 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 APBA3O96018 575 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 WDR93Q6P2C0 686 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 DPP8Q6V1X1 898 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-202ENST00000244303 CAPZA3Q96KX2 299 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 NUDT12Q9BQG2 462 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 MXD3Q9BW11 206 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
HIF3A-202ENST00000244303 PVALEFA0A1B0GWK0 134 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 ZNF263O14978 683 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 TUBBP07437 444 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 PLEKP08567 350 aaPredicted RBP16■□□□□ 0.15
HIF3A-202ENST00000244303 ALDH1B1P30837 517 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 CDK17Q00537 523 aa16■□□□□ 0.15
HIF3A-202ENST00000244303 GABPAQ06546 454 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms