RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.139e-7■□□□□ 11
VEGFA-201ENST00000230480 RRP36Q96EU6 259 aaKnown RBP15.89■□□□□ 0.13
VEGFA-201ENST00000230480 ZFP91Q96JP5 570 aaPredicted RBP15.89■□□□□ 0.13
VEGFA-201ENST00000230480 PXMP2Q9NR77 195 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 FAM184BQ9ULE4 1060 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 FRMPD4Q14CM0 1322 aa15.89■□□□□ 0.13
VEGFA-201ENST00000230480 DNM1LO00429 736 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 PPFIA3O75145 1194 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 ST3GAL1Q11201 340 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 LRRC26Q2I0M4 334 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 NECAB2Q7Z6G3 386 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 MCF2L2Q86YR7 1114 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 COPS5Q92905 334 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 RMDN3Q96TC7 470 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 PDCD2LQ9BRP1 358 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 C11orf49Q9H6J7 331 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 BCAS3Q9H6U6 928 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 VTA1Q9NP79 307 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 XPNPEP3Q9NQH7 507 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 PHF24Q9UPV7 400 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 CYP46A1Q9Y6A2 500 aa15.88■□□□□ 0.13
VEGFA-201ENST00000230480 DOCK5Q9H7D0 1870 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 EDIL3O43854 480 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 LARGE1O95461 756 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 NR3C2P08235 984 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 CST5P28325 142 aaPredicted RBP15.87■□□□□ 0.13
VEGFA-201ENST00000230480 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
VEGFA-201ENST00000230480 MRPS9P82933 396 aaKnown RBP15.87■□□□□ 0.13
VEGFA-201ENST00000230480 VSIG10LQ86VR7 867 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 SAMD3Q8N6K7 520 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 RBM28Q9NW13 759 aaKnown RBP15.87■□□□□ 0.13
VEGFA-201ENST00000230480 MAP3K20Q9NYL2 800 aaKnown RBP15.87■□□□□ 0.13
VEGFA-201ENST00000230480 ADD3Q9UEY8 706 aaKnown RBP15.87■□□□□ 0.13
VEGFA-201ENST00000230480 TPCN1Q9ULQ1 816 aa15.87■□□□□ 0.13
VEGFA-201ENST00000230480 TRIOBPQ9H2D6 2365 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 STXBP3O00186 592 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 PIK3CDO00329 1044 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 SLC34A2O95436 690 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 CTDNEP1O95476 244 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 RARBP10826 455 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 EIF2AK2P19525 551 aaKnown RBP15.86■□□□□ 0.13
VEGFA-201ENST00000230480 METAP2P50579 478 aaKnown RBP eCLIP15.86■□□□□ 0.13
VEGFA-201ENST00000230480 AK2P54819 239 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 BEX3Q00994 111 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 TNFAIP2Q03169 654 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 SEMA3FQ13275 785 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 SNX17Q15036 470 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 PGM5Q15124 567 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 IQSEC1Q6DN90 963 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 NSUN6Q8TEA1 469 aaKnown RBP15.86■□□□□ 0.13
VEGFA-201ENST00000230480 PHKBQ93100 1093 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 ZNF274Q96GC6 653 aaPredicted RBP15.86■□□□□ 0.13
VEGFA-201ENST00000230480 GRIN2DO15399 1336 aa15.86■□□□□ 0.13
VEGFA-201ENST00000230480 RANBP2P49792 3224 aaKnown RBP15.86■□□□□ 0.13
VEGFA-201ENST00000230480 GCOM1H8Y6P7 765 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-201ENST00000230480 PRPF3O43395 683 aaKnown RBP15.85■□□□□ 0.13
VEGFA-201ENST00000230480 POLR2MP0CAP2 368 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 IFNAR1P17181 557 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 KCNA10Q16322 511 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 UBE2SQ16763 222 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 DUSP28Q4G0W2 176 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 SYNE3Q6ZMZ3 975 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 FCHSD1Q86WN1 690 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 ARRDC4Q8NCT1 418 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 FERMT2Q96AC1 680 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 IWS1Q96ST2 819 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 SENP6Q9GZR1 1112 aaPredicted RBP15.85■□□□□ 0.13
VEGFA-201ENST00000230480 TELO2Q9Y4R8 837 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 SCN10AQ9Y5Y9 1956 aa15.85■□□□□ 0.13
VEGFA-201ENST00000230480 H0YGN5 161 aa15.84■□□□□ 0.13
VEGFA-201ENST00000230480 CLK2P49760 499 aaKnown RBP15.84■□□□□ 0.13
VEGFA-201ENST00000230480 SP2Q02086 613 aa15.84■□□□□ 0.13
VEGFA-201ENST00000230480 SCRN1Q12765 414 aa15.84■□□□□ 0.13
VEGFA-201ENST00000230480 PPP2R5BQ15173 497 aa15.84■□□□□ 0.13
VEGFA-201ENST00000230480 NPY5RQ15761 445 aa15.84■□□□□ 0.13
VEGFA-201ENST00000230480 PFKFB3Q16875 520 aaPredicted RBP15.84■□□□□ 0.13
VEGFA-201ENST00000230480 SLC39A5Q6ZMH5 540 aa15.84■□□□□ 0.13
VEGFA-201ENST00000230480 WDR11Q9BZH6 1224 aa15.84■□□□□ 0.13
VEGFA-201ENST00000230480 DYNC1LI2O43237 492 aaPredicted RBP15.83■□□□□ 0.12
VEGFA-201ENST00000230480 RBM25P49756 843 aaKnown RBP15.83■□□□□ 0.12
VEGFA-201ENST00000230480 ACLYP53396 1101 aa15.83■□□□□ 0.12
VEGFA-201ENST00000230480 PDE4DQ08499 809 aa15.83■□□□□ 0.12
VEGFA-201ENST00000230480 ME3Q16798 604 aa15.83■□□□□ 0.12
VEGFA-201ENST00000230480 AIFM3Q96NN9 605 aa15.83■□□□□ 0.12
VEGFA-201ENST00000230480 TSEN34Q9BSV6 310 aaKnown RBP15.83■□□□□ 0.12
VEGFA-201ENST00000230480 PRO3102Q9H379 93 aa15.83■□□□□ 0.12
VEGFA-201ENST00000230480 BARHL2Q9NY43 387 aa15.83■□□□□ 0.12
VEGFA-201ENST00000230480 DDX41Q9UJV9 622 aaKnown RBP15.83■□□□□ 0.12
VEGFA-201ENST00000230480 Q9Y3F1 56 aa15.83■□□□□ 0.12
VEGFA-201ENST00000230480 A0A1W2PQ45 241 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-201ENST00000230480 A0A1W2PQY0 241 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 PFKFB2O60825 505 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 EIF3JO75822 258 aaKnown RBP15.82■□□□□ 0.12
VEGFA-201ENST00000230480 FDPSP14324 419 aaKnown RBP15.82■□□□□ 0.12
VEGFA-201ENST00000230480 CDK7P50613 346 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 ATN1P54259 1190 aaPredicted RBP15.82■□□□□ 0.12
VEGFA-201ENST00000230480 ARHGAP1Q07960 439 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 LY6KQ17RY6 165 aa15.82■□□□□ 0.12
VEGFA-201ENST00000230480 C1orf53Q5VUE5 145 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms