RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 SYDE2Q5VT97 1194 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 KRT222Q8N1A0 295 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 CHURC1Q8WUH1 139 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 NT5C3AQ9H0P0 336 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 CLIC2O15247 247 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 SRGNP10124 158 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 MAGEA1P43355 309 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 ZFPM1Q8IX07 1006 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 AK8Q96MA6 479 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 CCPG1Q9ULG6 757 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 TRAF1Q13077 416 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 HLTFQ14527 1009 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTK7-201ENST00000230418 EZH2Q15910 746 aaKnown RBP16.02■□□□□ 0.16
PTK7-201ENST00000230418 SH2D4AQ9H788 454 aa16.02■□□□□ 0.16
PTK7-201ENST00000230418 LAD1O00515 517 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.15
PTK7-201ENST00000230418 NCAPHQ15003 741 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 GCOM1H8Y6P7 765 aaPredicted RBP16.02■□□□□ 0.15
PTK7-201ENST00000230418 EIF3JO75822 258 aaKnown RBP16.02■□□□□ 0.15
PTK7-201ENST00000230418 POLR2MP0CAP2 368 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 STAT2P52630 851 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 ZNF543Q08ER8 600 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 DPYDQ12882 1025 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 ADAM9Q13443 819 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.15
PTK7-201ENST00000230418 STXBP4Q6ZWJ1 553 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 LSM14BQ9BX40 385 aaKnown RBP16.02■□□□□ 0.15
PTK7-201ENST00000230418 GLT8D2Q9H1C3 349 aa16.02■□□□□ 0.15
PTK7-201ENST00000230418 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 TM4SF1P30408 202 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
PTK7-201ENST00000230418 STK4Q13043 487 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 TRIM14Q14142 442 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 POTEEQ6S8J3 1075 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 TXLNBQ8N3L3 684 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 SH2D3AQ9BRG2 576 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 SPZ1Q9BXG8 430 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 BUB1O43683 1085 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 PICK1Q9NRD5 415 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 CCNE1P24864 410 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 LRCH2Q5VUJ6 765 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 IQCEQ6IPM2 695 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 SLC30A10Q6XR72 485 aa16.01■□□□□ 0.15
PTK7-201ENST00000230418 IFIH1Q9BYX4 1025 aaKnown RBP16.01■□□□□ 0.15
PTK7-201ENST00000230418 TMEM110-MUSTN1A8MSY1 372 aa16■□□□□ 0.15
PTK7-201ENST00000230418 PLA2G4BP0C869 781 aa16■□□□□ 0.15
PTK7-201ENST00000230418 KRT13P13646 458 aa16■□□□□ 0.15
PTK7-201ENST00000230418 JMJD4Q9H9V9 463 aa16■□□□□ 0.15
PTK7-201ENST00000230418 DDTLA6NHG4 134 aaPredicted RBP16■□□□□ 0.15
PTK7-201ENST00000230418 GTF2F1P35269 517 aaKnown RBP eCLIP16■□□□□ 0.15
PTK7-201ENST00000230418 CEP112Q8N8E3 955 aa16■□□□□ 0.15
PTK7-201ENST00000230418 NAP1L4Q99733 375 aaKnown RBP16■□□□□ 0.15
PTK7-201ENST00000230418 ZNF341Q9BYN7 854 aa16■□□□□ 0.15
PTK7-201ENST00000230418 TRPM3Q9HCF6 1732 aaPredicted RBP16■□□□□ 0.15
PTK7-201ENST00000230418 PHRF1Q9P1Y6 1649 aaKnown RBP16■□□□□ 0.15
PTK7-201ENST00000230418 NPHP3-ACAD11A0A0J9YXS1 232 aa16■□□□□ 0.15
PTK7-201ENST00000230418 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
PTK7-201ENST00000230418 CETN1Q12798 172 aa16■□□□□ 0.15
PTK7-201ENST00000230418 PRAMEF18Q5VWM3 479 aa16■□□□□ 0.15
PTK7-201ENST00000230418 EHBP1Q8NDI1 1231 aa16■□□□□ 0.15
PTK7-201ENST00000230418 EPB41P11171 864 aaKnown RBP15.99■□□□□ 0.15
PTK7-201ENST00000230418 ARHGAP44Q17R89 818 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 PRMT6Q96LA8 375 aaPredicted RBP15.99■□□□□ 0.15
PTK7-201ENST00000230418 EXOC3O60645 756 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 MFAP3LO75121 409 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 PRPF6O94906 941 aaKnown RBP15.99■□□□□ 0.15
PTK7-201ENST00000230418 BMP6P22004 513 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 FXR1P51114 621 aaKnown RBP eCLIP15.99■□□□□ 0.15
PTK7-201ENST00000230418 ARHGAP4P98171 946 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 FAM212AQ96EL1 285 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
PTK7-201ENST00000230418 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 SLC37A4O43826 429 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 SEC31AO94979 1220 aaKnown RBP15.99■□□□□ 0.15
PTK7-201ENST00000230418 NDUFB10O96000 172 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 NR2F2P24468 414 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 RPL13P26373 211 aaKnown RBP15.99■□□□□ 0.15
PTK7-201ENST00000230418 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
PTK7-201ENST00000230418 TCHPQ9BT92 498 aa15.99■□□□□ 0.15
PTK7-201ENST00000230418 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
PTK7-201ENST00000230418 NCBP1Q09161 790 aaKnown RBP15.98■□□□□ 0.15
PTK7-201ENST00000230418 KLHL30Q0D2K2 578 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 SHROOM1Q2M3G4 852 aaPredicted RBP15.98■□□□□ 0.15
PTK7-201ENST00000230418 CERS5Q8N5B7 392 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 TRIM9Q9C026 710 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 TUBB4AP04350 444 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 RABGAP1Q9Y3P9 1069 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 KDM3AQ9Y4C1 1321 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 TTC26A0AVF1 554 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 PPP1R2P41236 205 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 RGS22Q8NE09 1264 aa15.98■□□□□ 0.15
PTK7-201ENST00000230418 SECISBP2LQ93073 1101 aaKnown RBP15.98■□□□□ 0.15
PTK7-201ENST00000230418 SCLT1Q96NL6 688 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms