RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 CYP27A1Q02318 531 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 TRAPPC11Q7Z392 1133 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 HEATR3Q7Z4Q2 680 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 RNF217Q8TC41 542 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 CEP89Q96ST8 783 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 DNAJC7Q99615 494 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 DUSP9Q99956 384 aaKnown RBP10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 ODF2LQ9ULJ1 636 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 RXRBP28702 533 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 TRIM14Q14142 442 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 TTI2Q6NXR4 508 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 CALR3Q96L12 384 aaKnown RBP10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 VEZTQ9HBM0 779 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 ATP8A2Q9NTI2 1148 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 MYO1AQ9UBC5 1043 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 MAD2L2Q9UI95 211 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 CAPN11Q9UMQ6 739 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 ZBTB12Q9Y330 459 aaPredicted RBP10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 POTEB2H3BUK9 544 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 FCER1AP12319 257 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 KIF5BP33176 963 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 STK4Q13043 487 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 TUBB2AQ13885 445 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 GRIK5Q16478 980 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 TBC1D9BQ66K14 1250 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 KCTD16Q68DU8 428 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 CCDC148Q8NFR7 591 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 TUBGCP2Q9BSJ2 902 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 TUBB2BQ9BVA1 445 aa10.46□□□□□ -0.74
HLA-DOA-201ENST00000229829 PDS5AQ29RF7 1337 aaKnown RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 ERCC3P19447 782 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 CALML3P27482 149 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 GBP2P32456 591 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 RPS8P62241 208 aaKnown RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 STIM1Q13586 685 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 SUGP1Q8IWZ8 645 aaKnown RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 CSGALNACT2Q8N6G5 542 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 GIMAP8Q8ND71 665 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 KBTBD4Q9NVX7 518 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 PSMD14O00487 310 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 PLEKP08567 350 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 DIXDC1Q155Q3 683 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 ANKRD40Q6AI12 368 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 KRT26Q7Z3Y9 468 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 SMCR8Q8TEV9 937 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 PLCD4Q9BRC7 762 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 PYM1Q9BRP8 204 aaKnown RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 ARPP21Q9UBL0 812 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 STX8Q9UNK0 236 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 PDE2AO00408 941 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 RHOBTB3O94955 611 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 PLCG1P19174 1290 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 TBC1D8BQ0IIM8 1120 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 TXNRD1Q16881 649 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 CCDC178Q5BJE1 867 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 LINC00116Q8NCU8 138 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 CABS1Q96KC9 395 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 TTYH3Q9C0H2 523 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 HAUS4Q9H6D7 363 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 ZNF652Q9Y2D9 606 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 SAR1BQ9Y6B6 198 aa10.45□□□□□ -0.74
HLA-DOA-201ENST00000229829 A0A1W2PQC6 194 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 MACROD2A1Z1Q3 448 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 EIF4E1BA6NMX2 242 aaKnown RBP10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 PSMA7O14818 248 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 MYBL2P10244 700 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 EEF1GP26641 437 aaKnown RBP10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 GGCXP38435 758 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 DNA2P51530 1060 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 SBK1Q52WX2 424 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 C12orf60Q5U649 245 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 KIAA1328Q86T90 577 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 SH3RF3Q8TEJ3 882 aaPredicted RBP10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 NHEJ1Q9H9Q4 299 aaPredicted RBP10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 STXBP3O00186 592 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 KIF1CO43896 1103 aaKnown RBP10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 SRGNP10124 158 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 GCKP35557 465 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 USP14P54578 494 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 PDE4DQ08499 809 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 PDCLQ13371 301 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 KCNB1Q14721 858 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 LETM2Q2VYF4 491 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 PCMTD1Q96MG8 357 aaPredicted RBP10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 THAP9Q9H5L6 903 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 MKNK2Q9HBH9 465 aa10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 SRP68Q9UHB9 627 aaKnown RBP10.44□□□□□ -0.74
HLA-DOA-201ENST00000229829 ZNF263O14978 683 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 PPP1R12BO60237 982 aaPredicted RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 CALRP27797 417 aaKnown RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 ELF1P32519 619 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 DNM2P50570 870 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 NEDD9Q14511 834 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 KCNV1Q6PIU1 500 aa10.43□□□□□ -0.74
HLA-DOA-201ENST00000229829 DZIP1Q86YF9 867 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms