RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 VAV2P52735 878 aa18.13■□□□□ 0.49
LTBR-201ENST00000228918 MUM1L1Q5H9M0 696 aa18.13■□□□□ 0.49
LTBR-201ENST00000228918 UNC13DQ70J99 1090 aa18.13■□□□□ 0.49
LTBR-201ENST00000228918 PNMA5Q96PV4 448 aa18.13■□□□□ 0.49
LTBR-201ENST00000228918 LTBP4Q8N2S1 1624 aa18.13■□□□□ 0.49
LTBR-201ENST00000228918 MYMKA6NI61 221 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 LRRIQ3A6PVS8 624 aaPredicted RBP18.12■□□□□ 0.49
LTBR-201ENST00000228918 IL1R1P14778 569 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 HNRNPH3P31942 346 aaKnown RBP18.12■□□□□ 0.49
LTBR-201ENST00000228918 VPS72Q15906 364 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 CALCRLQ16602 461 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 CAPZA3Q96KX2 299 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 UBA5Q9GZZ9 404 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
LTBR-201ENST00000228918 LRWD1Q9UFC0 647 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 PLIN4Q96Q06 1357 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 PVALEFA0A1B0GWK0 134 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 ZNF263O14978 683 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 UFL1O94874 794 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 PDHBP11177 359 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 RFC4P35249 363 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 CYP27A1Q02318 531 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 LARP4BQ92615 738 aaKnown RBP18.12■□□□□ 0.49
LTBR-201ENST00000228918 TSGA10Q9BZW7 698 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 SIK3Q9Y2K2 1263 aa18.12■□□□□ 0.49
LTBR-201ENST00000228918 GAKO14976 1311 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 ABCB11O95342 1321 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 TARSL2A2RTX5 802 aaKnown RBP18.11■□□□□ 0.49
LTBR-201ENST00000228918 SLC37A4O43826 429 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 MCM3P25205 808 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 LMAN1P49257 510 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 KIF5AQ12840 1032 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 VWA3BQ502W6 1294 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 FAM71BQ8TC56 605 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 FAM163AQ96GL9 167 aaPredicted RBP18.11■□□□□ 0.49
LTBR-201ENST00000228918 PLAGL2Q9UPG8 496 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 FAN1Q9Y2M0 1017 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 DUSP10Q9Y6W6 482 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 EDIL3O43854 480 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 TDP2O95551 362 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 GUF1Q8N442 669 aaKnown RBP18.11■□□□□ 0.49
LTBR-201ENST00000228918 SECISBP2LQ93073 1101 aaKnown RBP18.11■□□□□ 0.49
LTBR-201ENST00000228918 CCDC42Q96M95 316 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 ACBD3Q9H3P7 528 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 NDST4Q9H3R1 872 aa18.11■□□□□ 0.49
LTBR-201ENST00000228918 FRMPD2Q68DX3 1309 aaPredicted RBP18.1■□□□□ 0.49
LTBR-201ENST00000228918 MACROD2A1Z1Q3 448 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 PLEKP08567 350 aaPredicted RBP18.1■□□□□ 0.49
LTBR-201ENST00000228918 IDEP14735 1019 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 ATP2B4P23634 1241 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 ADCY7P51828 1080 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 MAN2A1Q16706 1144 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 TMEM266Q2M3C6 531 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 VIPAS39Q9H9C1 493 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 EPHB6O15197 1021 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 SPA17Q15506 151 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 MFSD14BQ5SR56 506 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 TRAPPC3LQ5T215 181 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 PRR5LQ6MZQ0 368 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 RAD54LQ92698 747 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
LTBR-201ENST00000228918 CCDC102AQ96A19 550 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 COA7Q96BR5 231 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 CDK5RAP3Q96JB5 506 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 MED4Q9NPJ6 270 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 ARHGAP20Q9P2F6 1191 aa18.1■□□□□ 0.49
LTBR-201ENST00000228918 POTEMA6NI47 508 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 PDE2AO00408 941 aaPredicted RBP18.09■□□□□ 0.49
LTBR-201ENST00000228918 LRRC63Q05C16 580 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 ZSCAN26Q16670 478 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 MAP9Q49MG5 647 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 ASPRV1Q53RT3 343 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 HSP90B2PQ58FF3 399 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 DYMQ7RTS9 669 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 FNBP4Q8N3X1 1017 aaPredicted RBP18.09■□□□□ 0.49
LTBR-201ENST00000228918 GGA1Q9UJY5 639 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 ZNF185O15231 689 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 LCA5LO95447 670 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 LRRC55Q6ZSA7 311 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 SLF2Q8IX21 1173 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 GOLGA5Q8TBA6 731 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 CAGE1Q8TC20 777 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 ZBTB9Q96C00 473 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 RAB34Q9BZG1 259 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 SH2D4AQ9H788 454 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 FAM207AQ9NSI2 230 aaPredicted RBP18.09■□□□□ 0.49
LTBR-201ENST00000228918 MTMR4Q9NYA4 1195 aa18.09■□□□□ 0.49
LTBR-201ENST00000228918 FEZ2Q9UHY8 353 aaPredicted RBP18.09■□□□□ 0.49
LTBR-201ENST00000228918 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.48
LTBR-201ENST00000228918 SNHG28P0DPA3 235 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 AARSP49588 968 aaKnown RBP eCLIP18.08■□□□□ 0.48
LTBR-201ENST00000228918 KIF11P52732 1056 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 EHHADHQ08426 723 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 PDIA5Q14554 519 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 CCDC96Q2M329 555 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 CRY2Q49AN0 593 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 TMEM119Q4V9L6 283 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 C2CD5Q86YS7 1000 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 TRIM58Q8NG06 486 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms