RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.23
GPN3-201ENST00000228827 SH2B2O14492 632 aaPredicted RBP16.51■□□□□ 0.23
GPN3-201ENST00000228827 CYTH3O43739 400 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 CDC45O75419 566 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 CABYRO75952 493 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 MYL3P08590 195 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 TXNP10599 105 aaKnown RBP16.51■□□□□ 0.23
GPN3-201ENST00000228827 HOXA13P31271 388 aaPredicted RBP16.51■□□□□ 0.23
GPN3-201ENST00000228827 C9orf50Q5SZB4 431 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 SEPT14Q6ZU15 432 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 RAB11FIP4Q86YS3 637 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 SCFD2Q8WU76 684 aa16.51■□□□□ 0.23
GPN3-201ENST00000228827 CCDC69A6NI79 296 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 ARIH2O95376 493 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 HSD17B4P51659 736 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 ITGA7Q13683 1181 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 SHHQ15465 462 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 FAM126BQ8IXS8 530 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 CTCFLQ8NI51 663 aaPredicted RBP16.5■□□□□ 0.23
GPN3-201ENST00000228827 MAF1Q9H063 256 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 TBX21Q9UL17 535 aa16.5■□□□□ 0.23
GPN3-201ENST00000228827 GRIN2DO15399 1336 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 PNMA6FA0A0J9YX94 578 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 TLR3O15455 904 aaKnown RBP16.49■□□□□ 0.23
GPN3-201ENST00000228827 DDAH1O94760 285 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 RXRAP19793 462 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 CPT1AP50416 773 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 EPHB4P54760 987 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 STXBP2Q15833 593 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 LY6KQ17RY6 165 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 TMEM87BQ96K49 555 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 LTBP2Q14767 1821 aa16.49■□□□□ 0.23
GPN3-201ENST00000228827 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
GPN3-201ENST00000228827 TIMP1P01033 207 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 KIF5BP33176 963 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 FPGSQ05932 587 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 Q7L0L9 218 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 SLC43A3Q8NBI5 491 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 IWS1Q96ST2 819 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 MTA3Q9BTC8 594 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 PPP1R12CQ9BZL4 782 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 POLR3EQ9NVU0 708 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 SZT2Q5T011 3432 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 GCOM1H8Y6P7 765 aaPredicted RBP16.48■□□□□ 0.23
GPN3-201ENST00000228827 PLEKHA8P1O95397 391 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 CD4P01730 458 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 NEFLP07196 543 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 NR3C2P08235 984 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 MYCLP12524 364 aaPredicted RBP16.48■□□□□ 0.23
GPN3-201ENST00000228827 PURAQ00577 322 aaKnown RBP16.48■□□□□ 0.23
GPN3-201ENST00000228827 BRDTQ58F21 947 aaPredicted RBP16.48■□□□□ 0.23
GPN3-201ENST00000228827 FCHSD1Q86WN1 690 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 CMTR1Q8N1G2 835 aaKnown RBP16.48■□□□□ 0.23
GPN3-201ENST00000228827 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 PPP1R13LQ8WUF5 828 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 MAP3K14Q99558 947 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 TRPV6Q9H1D0 765 aa16.48■□□□□ 0.23
GPN3-201ENST00000228827 LIFRP42702 1097 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 CHMP4BP1P59074 171 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 TRAF1Q13077 416 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 CCDC62Q6P9F0 684 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
GPN3-201ENST00000228827 RRP36Q96EU6 259 aaKnown RBP16.47■□□□□ 0.23
GPN3-201ENST00000228827 ZFP91Q96JP5 570 aaPredicted RBP16.47■□□□□ 0.23
GPN3-201ENST00000228827 NEK1Q96PY6 1258 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 PDCD2LQ9BRP1 358 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
GPN3-201ENST00000228827 A6NJR5 290 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 B4GALT4O60513 344 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.23
GPN3-201ENST00000228827 GH1P01241 217 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 CYP2C18P33260 490 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 GHRHRQ02643 423 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 CCDC82Q8N4S0 544 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 DEFB123Q8N688 67 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 IL31RAQ8NI17 732 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 MTG1Q9BT17 334 aaPredicted RBP16.46■□□□□ 0.23
GPN3-201ENST00000228827 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 MRVI1Q9Y6F6 885 aa16.46■□□□□ 0.23
GPN3-201ENST00000228827 LAMA3Q16787 3333 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 SORBS3O60504 671 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 PGM5Q15124 567 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 FAM47CQ5HY64 1035 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 MFSD5Q6N075 450 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 MICU3Q86XE3 530 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 AFG1LQ8WV93 481 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
GPN3-201ENST00000228827 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 ALDH8A1Q9H2A2 487 aaPredicted RBP16.45■□□□□ 0.22
GPN3-201ENST00000228827 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
GPN3-201ENST00000228827 MAP3K20Q9NYL2 800 aaKnown RBP16.45■□□□□ 0.22
GPN3-201ENST00000228827 SEC63Q9UGP8 760 aaKnown RBP16.45■□□□□ 0.22
GPN3-201ENST00000228827 UMODL1Q5DID0 1318 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms