RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 SALL4Q9UJQ4 1053 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 MYH14Q7Z406 1995 aaKnown RBP15.62■□□□□ 0.09
SF1-201ENST00000227503 ATP2C1P98194 919 aaPredicted RBP15.62■□□□□ 0.09
SF1-201ENST00000227503 PTGDRQ13258 359 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 UBE4AQ14139 1066 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 SNCBQ16143 134 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 TTC38Q5R3I4 469 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 PARP9Q8IXQ6 854 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 PIK3R5Q8WYR1 880 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 CNTNAP5Q8WYK1 1306 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 COL22A1Q8NFW1 1626 aaPredicted RBP15.62■□□□□ 0.09
SF1-201ENST00000227503 WNK3Q9BYP7 1800 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 DDAH1O94760 285 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 CALM1P0DP23 149 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 CALM2P0DP24 149 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 CALM3P0DP25 149 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 GCFC2P16383 781 aaKnown RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 EVX2Q03828 476 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 SRBD1Q8N5C6 995 aaKnown RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 CYFIP2Q96F07 1278 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 CAPN11Q9UMQ6 739 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
SF1-201ENST00000227503 BAZ2AQ9UIF9 1905 aaKnown RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 DLEC1Q9Y238 1755 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 GOLGA6L7A0A1B0GV03 622 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 KDM4FA0A1W2PPD8 638 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 LGALS16A8MUM7 142 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 EPB41P11171 864 aaKnown RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 PCP11498 1178 aaKnown RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 CYLC1P35663 651 aaPredicted RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 PTPROQ16827 1216 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 KDM7AQ6ZMT4 941 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 CCDC121Q6ZUS5 278 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 FUKQ8N0W3 1084 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 ACSBG1Q96GR2 724 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 FAM84BQ96KN1 310 aaPredicted RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 BCCIPQ9P287 314 aaKnown RBP eCLIP15.61■□□□□ 0.09
SF1-201ENST00000227503 A0A1B0GUL6 1792 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 MDH1P40925 334 aaKnown RBP15.61■□□□□ 0.09
SF1-201ENST00000227503 IQCEQ6IPM2 695 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 MICALCLQ6ZW33 695 aa15.61■□□□□ 0.09
SF1-201ENST00000227503 COL16A1Q07092 1604 aaPredicted RBP15.6■□□□□ 0.09
SF1-201ENST00000227503 USP17L12C9JPN9 530 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 USP17L21D6R901 530 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 HEXIM1O94992 359 aaKnown RBP15.6■□□□□ 0.09
SF1-201ENST00000227503 RPN1P04843 607 aaKnown RBP15.6■□□□□ 0.09
SF1-201ENST00000227503 CCNHP51946 323 aaPredicted RBP15.6■□□□□ 0.09
SF1-201ENST00000227503 SPAG1Q07617 926 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 IL17AQ16552 155 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 ALS2CLQ60I27 953 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 BSDC1Q9NW68 430 aaPredicted RBP15.6■□□□□ 0.09
SF1-201ENST00000227503 PACSIN2Q9UNF0 486 aaPredicted RBP15.6■□□□□ 0.09
SF1-201ENST00000227503 MCM7P33993 719 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 SF3B3Q15393 1217 aaKnown RBP15.6■□□□□ 0.09
SF1-201ENST00000227503 ERFEQ4G0M1 354 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 WLSQ5T9L3 541 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 EMBQ6PCB8 327 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 EHBP1Q8NDI1 1231 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 ZNF507Q8TCN5 953 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 SGSM3Q96HU1 749 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 MINPP1Q9UNW1 487 aa15.6■□□□□ 0.09
SF1-201ENST00000227503 A0A0G2JS52 829 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 PP2D1A8MPX8 630 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 NMT2O60551 498 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 PDXDC2PQ6P474 469 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 IQCKQ8N0W5 287 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 IFIH1Q9BYX4 1025 aaKnown RBP15.59■□□□□ 0.09
SF1-201ENST00000227503 ANO9A1A5B4 782 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 EPHB6O15197 1021 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 ORC4O43929 436 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 VEGFAP15692 232 aaPredicted RBP15.59■□□□□ 0.09
SF1-201ENST00000227503 PEX19P40855 299 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 VAV2P52735 878 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 CAVIN4Q5BKX8 364 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 TEX11Q8IYF3 940 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
SF1-201ENST00000227503 CCDC42Q96M95 316 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 ZNHIT6Q9NWK9 470 aaKnown RBP15.59■□□□□ 0.09
SF1-201ENST00000227503 SCN7AQ01118 1682 aa15.59■□□□□ 0.09
SF1-201ENST00000227503 EIF4E1BA6NMX2 242 aaKnown RBP15.58■□□□□ 0.09
SF1-201ENST00000227503 TBC1D8BQ0IIM8 1120 aa15.58■□□□□ 0.09
SF1-201ENST00000227503 BIRC2Q13490 618 aa15.58■□□□□ 0.09
SF1-201ENST00000227503 ZNF658Q5TYW1 1059 aaPredicted RBP15.58■□□□□ 0.09
SF1-201ENST00000227503 C2CD5Q86YS7 1000 aa15.58■□□□□ 0.09
SF1-201ENST00000227503 PLAAQ9Y263 795 aa15.58■□□□□ 0.09
SF1-201ENST00000227503 EME2A4GXA9 379 aaPredicted RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 TACC1O75410 805 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 FAM107AO95990 144 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 PURBQ96QR8 312 aaKnown RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 TAF1P21675 1872 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 NUTM2BA6NNL0 878 aaPredicted RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 NUTM2EB1AL46 878 aaPredicted RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 SCG2P13521 617 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 BRD2P25440 801 aaKnown RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 GBP2P32456 591 aaPredicted RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 TRAPPC10P48553 1259 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 ITGB3BPQ13352 177 aaPredicted RBP15.58■□□□□ 0.08
SF1-201ENST00000227503 SPA17Q15506 151 aa15.58■□□□□ 0.08
SF1-201ENST00000227503 MEA1Q16626 185 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms