RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 HEATR3Q7Z4Q2 680 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 ARRDC4Q8NCT1 418 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
LSM5-201ENST00000223084 MAF1Q9H063 256 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 NCOA5Q9HCD5 579 aaKnown RBP14.64□□□□□ -0.07
LSM5-201ENST00000223084 VTA1Q9NP79 307 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 PXMP2Q9NR77 195 aa14.64□□□□□ -0.07
LSM5-201ENST00000223084 ALPK3Q96L96 1907 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 LOC102724159A0A0B4J2E5 919 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 MYADML2A6NDP7 307 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 DNM1LO00429 736 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 DUSP11O75319 330 aaKnown RBP14.63□□□□□ -0.07
LSM5-201ENST00000223084 COL6A1P12109 1028 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 SMPD1P17405 629 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 TNFAIP2Q03169 654 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 STK3Q13188 491 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 PWP2Q15269 919 aaKnown RBP14.63□□□□□ -0.07
LSM5-201ENST00000223084 WWC2Q6AWC2 1192 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 DPF3Q92784 378 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 SENP6Q9GZR1 1112 aaPredicted RBP14.63□□□□□ -0.07
LSM5-201ENST00000223084 SYNRGQ9UMZ2 1314 aa14.63□□□□□ -0.07
LSM5-201ENST00000223084 NID2Q14112 1375 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 CCDC196A0A1B0GTZ2 297 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 KBTBD13C9JR72 458 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 ADAMTS4O75173 837 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 C1QBPQ07021 282 aaKnown RBP14.62□□□□□ -0.07
LSM5-201ENST00000223084 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 IQSEC1Q6DN90 963 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 TYW1BQ6NUM6 668 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 USP17L6PQ6QN14 398 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 SAMD3Q8N6K7 520 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 IL31RAQ8NI17 732 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 PHKBQ93100 1093 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 IL17RAQ96F46 866 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 ZFP91Q96JP5 570 aaPredicted RBP14.62□□□□□ -0.07
LSM5-201ENST00000223084 MPHOSPH6Q99547 160 aaKnown RBP14.62□□□□□ -0.07
LSM5-201ENST00000223084 HTATIP2Q9BUP3 242 aa14.62□□□□□ -0.07
LSM5-201ENST00000223084 MAP3K20Q9NYL2 800 aaKnown RBP14.62□□□□□ -0.07
LSM5-201ENST00000223084 GNEQ9Y223 722 aaKnown RBP14.62□□□□□ -0.07
LSM5-201ENST00000223084 B4DLN1 442 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 MEIS2O14770 477 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 DYNC1LI2O43237 492 aaPredicted RBP14.61□□□□□ -0.07
LSM5-201ENST00000223084 NR3C2P08235 984 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 C6orf222P0C671 652 aaPredicted RBP14.61□□□□□ -0.07
LSM5-201ENST00000223084 MYCLP12524 364 aaPredicted RBP14.61□□□□□ -0.07
LSM5-201ENST00000223084 MRPL12P52815 198 aaKnown RBP14.61□□□□□ -0.07
LSM5-201ENST00000223084 BEX3Q00994 111 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 NTRK3Q16288 839 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 UBE2SQ16763 222 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 SEPT14Q6ZU15 432 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 RNF180Q86T96 592 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 SMARCC2Q8TAQ2 1214 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 ZNF274Q96GC6 653 aaPredicted RBP14.61□□□□□ -0.07
LSM5-201ENST00000223084 IWS1Q96ST2 819 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 PDCD2LQ9BRP1 358 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 WDR11Q9BZH6 1224 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 PSTPIP2Q9H939 334 aa14.61□□□□□ -0.07
LSM5-201ENST00000223084 RBM47A0AV96 593 aaKnown RBP14.6□□□□□ -0.07
LSM5-201ENST00000223084 STXBP3O00186 592 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 CTAGE5O15320 804 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 ARIH2O95376 493 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 NEK4P51957 841 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 ATN1P54259 1190 aaPredicted RBP14.6□□□□□ -0.07
LSM5-201ENST00000223084 AK2P54819 239 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 NAPAP54920 295 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 GJA9P57773 515 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 PGM5Q15124 567 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 STXBP2Q15833 593 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 KCNA10Q16322 511 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 PKN1Q16512 942 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 LRRC26Q2I0M4 334 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 TLK2Q86UE8 772 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 KLHDC9Q8NEP7 349 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 COPS5Q92905 334 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 CUL5Q93034 780 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 UPF3AQ9H1J1 476 aaKnown RBP14.6□□□□□ -0.07
LSM5-201ENST00000223084 TPCN1Q9ULQ1 816 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 CEP290O15078 2479 aa14.6□□□□□ -0.07
LSM5-201ENST00000223084 PIK3CDO00329 1044 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 PRPF3O43395 683 aaKnown RBP14.59□□□□□ -0.07
LSM5-201ENST00000223084 DTNBO60941 627 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 PFKFB3Q16875 520 aaPredicted RBP14.59□□□□□ -0.07
LSM5-201ENST00000223084 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 GNASQ5JWF2 1037 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 CCSAPQ6IQ19 270 aaPredicted RBP14.59□□□□□ -0.07
LSM5-201ENST00000223084 AP5M1Q9H0R1 490 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 ALDH8A1Q9H2A2 487 aaPredicted RBP14.59□□□□□ -0.07
LSM5-201ENST00000223084 SPC25Q9HBM1 224 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 BARHL2Q9NY43 387 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 PHF24Q9UPV7 400 aa14.59□□□□□ -0.07
LSM5-201ENST00000223084 KIAA1217Q5T5P2 1943 aa14.58□□□□□ -0.07
LSM5-201ENST00000223084 EVI5O60447 810 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 EIF3JO75822 258 aaKnown RBP14.58□□□□□ -0.08
LSM5-201ENST00000223084 RGS20O76081 388 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 TXNP10599 105 aaKnown RBP14.58□□□□□ -0.08
LSM5-201ENST00000223084 SCG2P13521 617 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 IFNAR1P17181 557 aa14.58□□□□□ -0.08
LSM5-201ENST00000223084 ACLYP53396 1101 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms