RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 HAUS3Q68CZ6 603 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 CEP89Q96ST8 783 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 LSM14BQ9BX40 385 aaKnown RBP16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 CAPN11Q9UMQ6 739 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 KLK7P49862 253 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 NAP1L4Q99733 375 aaKnown RBP16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 PLEKHA4Q9H4M7 779 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 CHMP2AO43633 222 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 TFRCP02786 760 aaKnown RBP16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 EIF4A3P38919 411 aaKnown RBP16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 POLR2FP61218 127 aaKnown RBP16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 NPY5RQ15761 445 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 UNC13DQ70J99 1090 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 TBC1D16Q8TBP0 767 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 NOX5Q96PH1 765 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
UBE2D4-201ENST00000222402 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 CERKLQ49MI3 558 aaPredicted RBP16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 VWA3BQ502W6 1294 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 SFMBT2Q5VUG0 894 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 CCDC170Q8IYT3 715 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 GPR75-ASB3A0A0A6YYF3 556 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 ADAMTS3O15072 1205 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 TRIM37O94972 964 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 DNM3Q9UQ16 869 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L15C9J2P7 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L13C9JLJ4 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L11C9JVI0 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L18D6R9N7 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L22D6RA61 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L17D6RBQ6 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L19D6RCP7 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L20D6RJB6 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 CXCR5P32302 372 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 CYP4A11Q02928 519 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L24Q0WX57 530 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L6PQ6QN14 398 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 MTRQ99707 1265 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 KBTBD4Q9NVX7 518 aa16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 PDS5AQ29RF7 1337 aaKnown RBP16.56■□□□□ 0.24
UBE2D4-201ENST00000222402 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 hCG_1984214I3L0E3 225 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 PDHBP11177 359 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 FKBP3Q00688 224 aaKnown RBP16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 RASSF7Q02833 373 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 KLHL30Q0D2K2 578 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 ZNF713Q8N859 430 aaPredicted RBP16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 IFT81Q8WYA0 676 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 GJA10Q969M2 543 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 GLT8D2Q9H1C3 349 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 KDM3AQ9Y4C1 1321 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 SRGNP10124 158 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 PLA2G4AP47712 749 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 RPGRIP1Q96KN7 1286 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 LRP6O75581 1613 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 ATP1A1P05023 1023 aaKnown RBP16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 MSL1Q68DK7 614 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 DAGLBQ8NCG7 672 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 IQCDQ96DY2 449 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 SWAP70Q9UH65 585 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 NUP188Q5SRE5 1749 aa16.55■□□□□ 0.24
UBE2D4-201ENST00000222402 FAM13AO94988 1023 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 MOCS3O95396 460 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 KIF11P52732 1056 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 SNAP25P60880 206 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 VSNL1P62760 191 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 ICA1Q05084 483 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 CASP8Q14790 479 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 DNAJC21Q5F1R6 531 aaKnown RBP16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 MXD3Q9BW11 206 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 MYMKA6NI61 221 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 PABPC4Q13310 644 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 ADAM9Q13443 819 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 C8orf74Q6P047 294 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 SYCP3Q8IZU3 236 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 FAM170AA1A519 330 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 GOLGA6L10A6NI86 522 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 MEIS1O00470 390 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 VAV2P52735 878 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 MRPS25P82663 173 aaKnown RBP16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 TTI2Q6NXR4 508 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 SLC51AQ86UW1 340 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 C7orf25Q9BPX7 421 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 COA1Q9GZY4 146 aa16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
UBE2D4-201ENST00000222402 ZYXQ15942 572 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 ASIC2Q16515 512 aa16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 NOA1Q8NC60 698 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-201ENST00000222402 RAD54LQ92698 747 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms