RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DBN1Q16643 649 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 CRACR2BQ8N4Y2 399 aaPredicted RBP15.08■□□□□ 0.01
GABPB1-201ENST00000220429 FANCBQ8NB91 859 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 WASF1Q92558 559 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 SLX1AQ9BQ83 275 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 GORASP1Q9BQQ3 440 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 ANKRD2Q9GZV1 360 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 DLEC1Q9Y238 1755 aa15.08■□□□□ 0.01
GABPB1-201ENST00000220429 DNM1LO00429 736 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 ANP32DO95626 131 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 ZBED6P86452 979 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 MECOMQ03112 1051 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 TXNRD3Q86VQ6 643 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 TRIM22Q8IYM9 498 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 CCT8L2Q96SF2 557 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 KCNJ14Q9UNX9 436 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 PDS5AQ29RF7 1337 aaKnown RBP15.08■□□□□ 0
GABPB1-201ENST00000220429 TARSL2A2RTX5 802 aaKnown RBP15.08■□□□□ 0
GABPB1-201ENST00000220429 A6NHS1 94 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 BTBD18B2RXH4 712 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 MMP1P03956 469 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 ZRSR2Q15696 482 aaKnown RBP15.08■□□□□ 0
GABPB1-201ENST00000220429 SPECC1Q5M775 1068 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 SHC4Q6S5L8 630 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 SDCCAG8Q86SQ7 713 aaPredicted RBP15.08■□□□□ 0
GABPB1-201ENST00000220429 CCDC170Q8IYT3 715 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 GALNT15Q8N3T1 639 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 ENAHQ8N8S7 591 aaPredicted RBP15.08■□□□□ 0
GABPB1-201ENST00000220429 ATL2Q8NHH9 583 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 ZFAND2BQ8WV99 257 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 MMADHCQ9H3L0 296 aaPredicted RBP15.08■□□□□ 0
GABPB1-201ENST00000220429 BAIAP2L1Q9UHR4 511 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 ADGRG1Q9Y653 693 aa15.08■□□□□ 0
GABPB1-201ENST00000220429 LAMB1P07942 1786 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 A0A0U1RQJ8 604 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 SMIM24O75264 130 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 EPB41P11171 864 aaKnown RBP15.07■□□□□ 0
GABPB1-201ENST00000220429 ALDH1B1P30837 517 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 HDLBPQ00341 1268 aaKnown RBP15.07■□□□□ 0
GABPB1-201ENST00000220429 EVX2Q03828 476 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 BLMHQ13867 455 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 NOSTRINQ8IVI9 506 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 ATRIPQ8WXE1 791 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 ZNF570Q96NI8 536 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 TRIM4Q9C037 500 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 HPSEQ9Y251 543 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 MAST2Q6P0Q8 1798 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 PRDM1O75626 825 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 DEXIO95424 95 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 SLC3A2P08195 630 aaKnown RBP15.07■□□□□ 0
GABPB1-201ENST00000220429 FGRP09769 529 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 PRDX5P30044 214 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 ATP1A2P50993 1020 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 CRELD2Q6UXH1 353 aaPredicted RBP15.07■□□□□ 0
GABPB1-201ENST00000220429 SLC51AQ86UW1 340 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 NLRP14Q86W24 1093 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 DIS3L2Q8IYB7 885 aaKnown RBP15.07■□□□□ 0
GABPB1-201ENST00000220429 GSPT2Q8IYD1 628 aaKnown RBP15.07■□□□□ 0
GABPB1-201ENST00000220429 ACRBPQ8NEB7 543 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 MYCBPAPQ8TBZ2 947 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 RBM17Q96I25 401 aaKnown RBP15.07■□□□□ 0
GABPB1-201ENST00000220429 YIPF2Q9BWQ6 316 aa15.07■□□□□ 0
GABPB1-201ENST00000220429 IRS2Q9Y4H2 1338 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 RBM47A0AV96 593 aaKnown RBP15.06■□□□□ 0
GABPB1-201ENST00000220429 ATP4AP20648 1035 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 MYL5Q02045 173 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 ANKRD20A8PQ5CZ79 823 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 BICD1Q96G01 975 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 ZSCAN10Q96SZ4 725 aaPredicted RBP15.06■□□□□ 0
GABPB1-201ENST00000220429 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.06■□□□□ 0
GABPB1-201ENST00000220429 INTS13Q9NVM9 706 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 AATFQ9NY61 560 aaKnown RBP eCLIP15.06■□□□□ 03e-7■■■□□ 15.6
GABPB1-201ENST00000220429 MYO1AQ9UBC5 1043 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 BAZ2BQ9UIF8 2168 aaKnown RBP15.06■□□□□ 0
GABPB1-201ENST00000220429 SOWAHDA6NJG2 315 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 USP17L12C9JPN9 530 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 USP17L21D6R901 530 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 ZMYND10O75800 440 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 POLD1P28340 1107 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 TOB1P50616 345 aaPredicted RBP15.06■□□□□ 0
GABPB1-201ENST00000220429 PTGISQ16647 500 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 ACBD5Q5T8D3 534 aaPredicted RBP15.06■□□□□ 0
GABPB1-201ENST00000220429 CCNI2Q6ZMN8 369 aaPredicted RBP15.06■□□□□ 0
GABPB1-201ENST00000220429 OSBPL7Q9BZF2 842 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 ZCWPW1Q9H0M4 648 aa15.06■□□□□ 0
GABPB1-201ENST00000220429 FAM237AA0A1B0GTK4 181 aa15.05■□□□□ 0
GABPB1-201ENST00000220429 SYKP43405 635 aa15.05■□□□□ 0
GABPB1-201ENST00000220429 ELF3P78545 371 aaPredicted RBP15.05■□□□□ 0
GABPB1-201ENST00000220429 TTMPQ5BVD1 217 aa15.05■□□□□ 0
GABPB1-201ENST00000220429 TAX1BP1Q86VP1 789 aa15.05■□□□□ 0
GABPB1-201ENST00000220429 JAG2Q9Y219 1238 aa15.05■□□□□ 0
GABPB1-201ENST00000220429 KIAA1551Q9HCM1 1747 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 A0A1B0GVG6 124 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 FAM107AO95990 144 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 SCNN1BP51168 640 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 CUL3Q13618 768 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 SAFBQ15424 915 aaKnown RBP eCLIP15.05■□□□□ -0
GABPB1-201ENST00000220429 SPRED3Q2MJR0 410 aa15.05■□□□□ -0
GABPB1-201ENST00000220429 RESP18Q5W5W9 173 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms