RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 CCDC170Q8IYT3 715 aa14.79□□□□□ -0.04
SF3A1-201ENST00000215793 RNF169Q8NCN4 708 aa14.79□□□□□ -0.04
SF3A1-201ENST00000215793 BEGAINQ9BUH8 593 aa14.79□□□□□ -0.04
SF3A1-201ENST00000215793 KANSL2Q9H9L4 492 aa14.79□□□□□ -0.04
SF3A1-201ENST00000215793 CAPN7Q9Y6W3 813 aa14.79□□□□□ -0.04
SF3A1-201ENST00000215793 GARSP41250 739 aaKnown RBP14.79□□□□□ -0.04
SF3A1-201ENST00000215793 SLC7A3Q8WY07 619 aa14.79□□□□□ -0.04
SF3A1-201ENST00000215793 ABCD1P33897 745 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
SF3A1-201ENST00000215793 DPY19L2Q6NUT2 758 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 UNC5CLQ8IV45 518 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 LINC00301Q8NCQ3 95 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 ANO3Q9BYT9 981 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 WDR70Q9NW82 654 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 OATP04181 439 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 PIK3CAP42336 1068 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 PLCB4Q15147 1175 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 RBBP5Q15291 538 aaKnown RBP14.78□□□□□ -0.04
SF3A1-201ENST00000215793 ADAT2Q7Z6V5 191 aaKnown RBP14.78□□□□□ -0.04
SF3A1-201ENST00000215793 GBP7Q8N8V2 638 aaPredicted RBP14.78□□□□□ -0.04
SF3A1-201ENST00000215793 MAGOHBQ96A72 148 aaKnown RBP14.78□□□□□ -0.04
SF3A1-201ENST00000215793 BCS1LQ9Y276 419 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 AFPP02771 609 aaKnown RBP14.78□□□□□ -0.04
SF3A1-201ENST00000215793 PTPROQ16827 1216 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 ZNF658Q5TYW1 1059 aaPredicted RBP14.78□□□□□ -0.04
SF3A1-201ENST00000215793 FAM186BQ8IYM0 893 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 PPP1R13BQ96KQ4 1090 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 A6NJR5 290 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 SLC35F6Q8N357 371 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 LRRC8CQ8TDW0 803 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 ANKFY1Q9P2R3 1169 aa14.78□□□□□ -0.04
SF3A1-201ENST00000215793 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.04
SF3A1-201ENST00000215793 ZBTB24O43167 697 aaPredicted RBP14.77□□□□□ -0.04
SF3A1-201ENST00000215793 MESDQ14696 234 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 MUM1Q2TAK8 710 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 DPCR1Q3MIW9 517 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 SULF1Q8IWU6 871 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 TLR7Q9NYK1 1049 aaKnown RBP14.77□□□□□ -0.04
SF3A1-201ENST00000215793 FAN1Q9Y2M0 1017 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 H7C0C1 242 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 BBOX1O75936 387 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 RFC1P35251 1148 aaPredicted RBP14.77□□□□□ -0.04
SF3A1-201ENST00000215793 ATP5OP48047 213 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 SH3BGRP55822 239 aaPredicted RBP14.77□□□□□ -0.04
SF3A1-201ENST00000215793 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 NCAPG2Q86XI2 1143 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 NME8Q8N427 588 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 NACC1Q96RE7 527 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 SERPINB13Q9UIV8 391 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 JRKLQ9Y4A0 524 aa14.77□□□□□ -0.04
SF3A1-201ENST00000215793 GOLGA8CPA6NN73 597 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 MMP1P03956 469 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 GSTA1P08263 222 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 GSTA2P09210 222 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 KCTD2Q14681 263 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 ENOX1Q8TC92 643 aaKnown RBP14.77□□□□□ -0.05
SF3A1-201ENST00000215793 CDHR1Q96JP9 859 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 ZNF577Q9BSK1 485 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 SPZ1Q9BXG8 430 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 TLR3O15455 904 aaKnown RBP14.77□□□□□ -0.05
SF3A1-201ENST00000215793 HSPA6P17066 643 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 SEPT2Q15019 361 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 DBN1Q16643 649 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 EXOC8Q8IYI6 725 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 EEF2KMTQ96G04 330 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 ACCSQ96QU6 501 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 TMEM206Q9H813 350 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 EFCC1Q9HA90 598 aa14.77□□□□□ -0.05
SF3A1-201ENST00000215793 IPO11Q9UI26 975 aaKnown RBP14.77□□□□□ -0.05
SF3A1-201ENST00000215793 DISP1Q96F81 1524 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 WDR46O15213 610 aaKnown RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 EPHB4P54760 987 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 NXNQ6DKJ4 435 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 CAPN12Q6ZSI9 719 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 ZNF589Q86UQ0 364 aaPredicted RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 ZBTB1Q9Y2K1 713 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 DAAM1Q9Y4D1 1078 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 SUN1O94901 812 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 IL9RQ01113 521 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 NAA35Q5VZE5 725 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 CC2D2BQ6DHV5 1058 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 GADL1Q6ZQY3 521 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 GAS2L3Q86XJ1 694 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 FAM193BQ96PV7 902 aaPredicted RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 MAD1L1Q9Y6D9 718 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 FAM170AA1A519 330 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 HMGB1P1B2RPK0 211 aaPredicted RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 INHBAP08476 426 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 SLC8A1P32418 973 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 LIFRP42702 1097 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 YWHAGP61981 247 aaKnown RBP eCLIP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 UHMK1Q8TAS1 419 aaKnown RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 DISC1Q9NRI5 854 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 PYCARDQ9ULZ3 195 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 EVI5O60447 810 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 USP14P54578 494 aa14.76□□□□□ -0.05
SF3A1-201ENST00000215793 EAPPQ56P03 285 aaPredicted RBP14.76□□□□□ -0.05
SF3A1-201ENST00000215793 TBCKQ8TEA7 893 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms