RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 SOX1O00570 391 aaPredicted RBP32.56■■■□□ 2.8
PDCD2-201ENST00000167218 ITGB8P26012 769 aa32.56■■■□□ 2.8
PDCD2-201ENST00000167218 IWS1Q96ST2 819 aa32.56■■■□□ 2.8
PDCD2-201ENST00000167218 MAP3K20Q9NYL2 800 aaKnown RBP32.56■■■□□ 2.8
PDCD2-201ENST00000167218 A0A0U1RQG5 324 aaPredicted RBP32.55■■■□□ 2.8
PDCD2-201ENST00000167218 ARVCFO00192 962 aa32.55■■■□□ 2.8
PDCD2-201ENST00000167218 KIAA0355O15063 1070 aa32.55■■■□□ 2.8
PDCD2-201ENST00000167218 SMARCA1P28370 1054 aa32.55■■■□□ 2.8
PDCD2-201ENST00000167218 CTCFLQ8NI51 663 aaPredicted RBP32.55■■■□□ 2.8
PDCD2-201ENST00000167218 SCFD2Q8WU76 684 aa32.55■■■□□ 2.8
PDCD2-201ENST00000167218 NEK1Q96PY6 1258 aa32.55■■■□□ 2.8
PDCD2-201ENST00000167218 SPZ1Q9BXG8 430 aa32.55■■■□□ 2.8
PDCD2-201ENST00000167218 LAMA2P24043 3122 aaKnown RBP32.54■■■□□ 2.8
PDCD2-201ENST00000167218 CCDC69A6NI79 296 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 KIF5BP33176 963 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 EXOSC10Q01780 885 aaKnown RBP32.54■■■□□ 2.8
PDCD2-201ENST00000167218 ADCK5Q3MIX3 580 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 NFXL1Q6ZNB6 911 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 SAMD3Q8N6K7 520 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 SLC43A3Q8NBI5 491 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 BADQ92934 168 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 VTI1AQ96AJ9 217 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 PXMP2Q9NR77 195 aa32.54■■■□□ 2.8
PDCD2-201ENST00000167218 GRIN2DO15399 1336 aa32.53■■■□□ 2.8
PDCD2-201ENST00000167218 CABYRO75952 493 aa32.53■■■□□ 2.8
PDCD2-201ENST00000167218 ARIH2O95376 493 aa32.53■■■□□ 2.8
PDCD2-201ENST00000167218 TRAF1Q13077 416 aa32.53■■■□□ 2.8
PDCD2-201ENST00000167218 CCDC62Q6P9F0 684 aa32.53■■■□□ 2.8
PDCD2-201ENST00000167218 SGMS1Q86VZ5 419 aa32.53■■■□□ 2.8
PDCD2-201ENST00000167218 DCDC2CA8MYV0 355 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 NKRFO15226 690 aaKnown RBP eCLIP32.52■■■□□ 2.8
PDCD2-201ENST00000167218 ZEB2O60315 1214 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 PLEKHA8P1O95397 391 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 EIF2AK2P19525 551 aaKnown RBP32.52■■■□□ 2.8
PDCD2-201ENST00000167218 RXRAP19793 462 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 PPP2R5BQ15173 497 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 LRIT3Q3SXY7 679 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 ARHGEF16Q5VV41 709 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 SRBD1Q8N5C6 995 aaKnown RBP32.52■■■□□ 2.8
PDCD2-201ENST00000167218 COPS5Q92905 334 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 KCNB2Q92953 911 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 TMEM39AQ9NV64 488 aa32.52■■■□□ 2.8
PDCD2-201ENST00000167218 MROH7Q68CQ1 1323 aa32.51■■■□□ 2.8
PDCD2-201ENST00000167218 HOXA13P31271 388 aaPredicted RBP32.51■■■□□ 2.79
PDCD2-201ENST00000167218 STXBP2Q15833 593 aa32.51■■■□□ 2.79
PDCD2-201ENST00000167218 FAM126BQ8IXS8 530 aa32.51■■■□□ 2.79
PDCD2-201ENST00000167218 OR6J1Q8NGC5 347 aa32.51■■■□□ 2.79
PDCD2-201ENST00000167218 PIBF1Q8WXW3 757 aa32.51■■■□□ 2.79
PDCD2-201ENST00000167218 LZTS2Q9BRK4 669 aa32.51■■■□□ 2.79
PDCD2-201ENST00000167218 TBX21Q9UL17 535 aa32.51■■■□□ 2.79
PDCD2-201ENST00000167218 SLC12A7Q9Y666 1083 aa32.51■■■□□ 2.79
PDCD2-201ENST00000167218 NR3C2P08235 984 aa32.5■■■□□ 2.79
PDCD2-201ENST00000167218 CALM1P0DP23 149 aa32.5■■■□□ 2.79
PDCD2-201ENST00000167218 CALM2P0DP24 149 aa32.5■■■□□ 2.79
PDCD2-201ENST00000167218 CALM3P0DP25 149 aa32.5■■■□□ 2.79
PDCD2-201ENST00000167218 TXNP10599 105 aaKnown RBP32.5■■■□□ 2.79
PDCD2-201ENST00000167218 GNAQP50148 359 aa32.5■■■□□ 2.79
PDCD2-201ENST00000167218 TTLL4Q14679 1199 aa32.5■■■□□ 2.79
PDCD2-201ENST00000167218 DHX32Q7L7V1 743 aaKnown RBP32.5■■■□□ 2.79
PDCD2-201ENST00000167218 LRCH3Q96II8 777 aa32.5■■■□□ 2.79
PDCD2-201ENST00000167218 RAB11FIP4Q86YS3 637 aa32.49■■■□□ 2.79
PDCD2-201ENST00000167218 CMTR1Q8N1G2 835 aaKnown RBP32.49■■■□□ 2.79
PDCD2-201ENST00000167218 TCEANC2Q96MN5 208 aa32.49■■■□□ 2.79
PDCD2-201ENST00000167218 PDCD2LQ9BRP1 358 aa32.49■■■□□ 2.79
PDCD2-201ENST00000167218 CD4P01730 458 aa32.48■■■□□ 2.79
PDCD2-201ENST00000167218 ITGA7Q13683 1181 aa32.48■■■□□ 2.79
PDCD2-201ENST00000167218 SEPT14Q6ZU15 432 aa32.48■■■□□ 2.79
PDCD2-201ENST00000167218 RRP36Q96EU6 259 aaKnown RBP32.48■■■□□ 2.79
PDCD2-201ENST00000167218 SCN10AQ9Y5Y9 1956 aa32.47■■■□□ 2.79
PDCD2-201ENST00000167218 A6NJR5 290 aa32.47■■■□□ 2.79
PDCD2-201ENST00000167218 GCOM1H8Y6P7 765 aaPredicted RBP32.47■■■□□ 2.79
PDCD2-201ENST00000167218 EIF3JO75822 258 aaKnown RBP32.47■■■□□ 2.79
PDCD2-201ENST00000167218 POLR2MP0CAP2 368 aa32.47■■■□□ 2.79
PDCD2-201ENST00000167218 CPT1AP50416 773 aa32.47■■■□□ 2.79
PDCD2-201ENST00000167218 PSMC6P62333 389 aa32.47■■■□□ 2.79
PDCD2-201ENST00000167218 PURAQ00577 322 aaKnown RBP32.47■■■□□ 2.79
PDCD2-201ENST00000167218 KRT32Q14532 448 aa32.47■■■□□ 2.79
PDCD2-201ENST00000167218 FANCBQ8NB91 859 aa32.47■■■□□ 2.79
PDCD2-201ENST00000167218 RAG1P15918 1043 aa32.46■■■□□ 2.79
PDCD2-201ENST00000167218 HSPA4P34932 840 aa32.46■■■□□ 2.79
PDCD2-201ENST00000167218 POLR3EQ9NVU0 708 aa32.46■■■□□ 2.79
PDCD2-201ENST00000167218 PPP4R2Q9NY27 417 aa32.46■■■□□ 2.79
PDCD2-201ENST00000167218 BRPF3Q9ULD4 1205 aa32.46■■■□□ 2.79
PDCD2-201ENST00000167218 RGS20O76081 388 aa32.45■■■□□ 2.79
PDCD2-201ENST00000167218 LY6KQ17RY6 165 aa32.45■■■□□ 2.79
PDCD2-201ENST00000167218 APOA5Q6Q788 366 aa32.45■■■□□ 2.79
PDCD2-201ENST00000167218 TMTC3Q6ZXV5 915 aa32.45■■■□□ 2.79
PDCD2-201ENST00000167218 VSIG10LQ86VR7 867 aa32.45■■■□□ 2.79
PDCD2-201ENST00000167218 IL31RAQ8NI17 732 aa32.45■■■□□ 2.79
PDCD2-201ENST00000167218 SEZ6LQ9BYH1 1024 aa32.45■■■□□ 2.79
PDCD2-201ENST00000167218 TIMP1P01033 207 aa32.44■■■□□ 2.78
PDCD2-201ENST00000167218 PGM5Q15124 567 aa32.44■■■□□ 2.78
PDCD2-201ENST00000167218 ERICH6BQ5W0A0 696 aa32.44■■■□□ 2.78
PDCD2-201ENST00000167218 MICU3Q86XE3 530 aa32.44■■■□□ 2.78
PDCD2-201ENST00000167218 DDX41Q9UJV9 622 aaKnown RBP32.44■■■□□ 2.78
PDCD2-201ENST00000167218 MYH7BA7E2Y1 1941 aa32.43■■■□□ 2.78
PDCD2-201ENST00000167218 EPHB4P54760 987 aa32.43■■■□□ 2.78
PDCD2-201ENST00000167218 ARHGAP1Q07960 439 aa32.43■■■□□ 2.78
PDCD2-201ENST00000167218 SHHQ15465 462 aa32.43■■■□□ 2.78
PDCD2-201ENST00000167218 C9orf50Q5SZB4 431 aa32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms