RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 C3orf67Q6ZVT6 689 aa18.54■□□□□ 0.56
CTDP1-201ENST00000075430 NBPF5PQ86XG9 351 aaPredicted RBP18.54■□□□□ 0.56
CTDP1-201ENST00000075430 PNMA1Q8ND90 353 aa18.54■□□□□ 0.56
CTDP1-201ENST00000075430 CNTNAP5Q8WYK1 1306 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 PALMO75781 387 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 FUT2Q10981 343 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 TTI2Q6NXR4 508 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 GBP6Q6ZN66 633 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 DPH5Q9H2P9 285 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 N4BP2Q86UW6 1770 aaPredicted RBP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 EIF4E1BA6NMX2 242 aaKnown RBP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 KCNK3O14649 394 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 CEP104O60308 925 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 SRGNP10124 158 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 HAUS3Q68CZ6 603 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 SLC51AQ86UW1 340 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 TBC1D5Q92609 795 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 CELF1Q92879 486 aaKnown RBP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 PACSIN1Q9BY11 444 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 ZC3H4Q9UPT8 1303 aaKnown RBP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 EEF1GP26641 437 aaKnown RBP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 AARSP49588 968 aaKnown RBP eCLIP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 CDR1P51861 262 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 CT47A1Q5JQC4 288 aaPredicted RBP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 DZIP1Q86YF9 867 aaKnown RBP18.53■□□□□ 0.56
CTDP1-201ENST00000075430 AMOTL1Q8IY63 956 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 GIMAP7Q8NHV1 300 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 NDST4Q9H3R1 872 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 VIPAS39Q9H9C1 493 aa18.53■□□□□ 0.56
CTDP1-201ENST00000075430 POTEMA6NI47 508 aa18.52■□□□□ 0.56
CTDP1-201ENST00000075430 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.56
CTDP1-201ENST00000075430 ZNF507Q8TCN5 953 aa18.52■□□□□ 0.56
CTDP1-201ENST00000075430 TMEM260Q9NX78 707 aa18.52■□□□□ 0.56
CTDP1-201ENST00000075430 KCNV1Q6PIU1 500 aa18.52■□□□□ 0.56
CTDP1-201ENST00000075430 TBC1D31Q96DN5 1066 aa18.52■□□□□ 0.56
CTDP1-201ENST00000075430 C8orf37Q96NL8 207 aa18.52■□□□□ 0.56
CTDP1-201ENST00000075430 RBM28Q9NW13 759 aaKnown RBP18.52■□□□□ 0.56
CTDP1-201ENST00000075430 NR1D1P20393 614 aa18.52■□□□□ 0.55
CTDP1-201ENST00000075430 EPHB4P54760 987 aa18.52■□□□□ 0.55
CTDP1-201ENST00000075430 KIAA0753Q2KHM9 967 aa18.52■□□□□ 0.55
CTDP1-201ENST00000075430 TCERG1LQ5VWI1 586 aa18.52■□□□□ 0.55
CTDP1-201ENST00000075430 NCAPGQ9BPX3 1015 aa18.52■□□□□ 0.55
CTDP1-201ENST00000075430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.52■□□□□ 0.552e-7■■■■■ 107
CTDP1-201ENST00000075430 GGT7Q9UJ14 662 aa18.52■□□□□ 0.55
CTDP1-201ENST00000075430 USP17L2Q6R6M4 530 aa18.51■□□□□ 0.55
CTDP1-201ENST00000075430 CCDC91Q7Z6B0 441 aa18.51■□□□□ 0.55
CTDP1-201ENST00000075430 AENQ8WTP8 325 aaKnown RBP18.51■□□□□ 0.55
CTDP1-201ENST00000075430 CCNE1P24864 410 aa18.51■□□□□ 0.55
CTDP1-201ENST00000075430 LSP1P33241 339 aa18.51■□□□□ 0.55
CTDP1-201ENST00000075430 NOX5Q96PH1 765 aa18.51■□□□□ 0.55
CTDP1-201ENST00000075430 PLAAQ9Y263 795 aa18.51■□□□□ 0.55
CTDP1-201ENST00000075430 TSPY3P0CV98 308 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 TSPY8P0CW00 308 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 FAM133AQ8N9E0 248 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 TAF4BQ92750 862 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 NGLY1Q96IV0 654 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 SEPT11Q9NVA2 429 aaKnown RBP18.5■□□□□ 0.55
CTDP1-201ENST00000075430 GOLGA8KD6RF30 607 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 RPS6KA5O75582 802 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 LONP1P36776 959 aaKnown RBP18.5■□□□□ 0.55
CTDP1-201ENST00000075430 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 INTS5Q6P9B9 1019 aaKnown RBP18.5■□□□□ 0.55
CTDP1-201ENST00000075430 TRMT1LQ7Z2T5 733 aaKnown RBP18.5■□□□□ 0.55
CTDP1-201ENST00000075430 TAX1BP1Q86VP1 789 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 ELOA2Q8IYF1 753 aaPredicted RBP18.5■□□□□ 0.55
CTDP1-201ENST00000075430 PDS5AQ29RF7 1337 aaKnown RBP18.5■□□□□ 0.55
CTDP1-201ENST00000075430 COPB2P35606 906 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 CFAP221Q4G0U5 840 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
CTDP1-201ENST00000075430 TRIM9Q9C026 710 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 SH2D4AQ9H788 454 aa18.5■□□□□ 0.55
CTDP1-201ENST00000075430 ERVV-1B6SEH8 477 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 FGFR2P21802 821 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 KIF5BP33176 963 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 IFT20Q8IY31 132 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 DDX47Q9H0S4 455 aaKnown RBP18.49■□□□□ 0.55
CTDP1-201ENST00000075430 SEMA6BQ9H3T3 888 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 GRIN2DO15399 1336 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 SCN11AQ9UI33 1791 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 GNPATO15228 680 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 KLRC4O43908 158 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 PFKFB3Q16875 520 aaPredicted RBP18.49■□□□□ 0.55
CTDP1-201ENST00000075430 MAPKAPK5Q8IW41 473 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 RPGRIP1Q96KN7 1286 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 LSM14BQ9BX40 385 aaKnown RBP18.49■□□□□ 0.55
CTDP1-201ENST00000075430 ZNF233A6NK53 670 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 KRT18P05783 430 aaKnown RBP18.49■□□□□ 0.55
CTDP1-201ENST00000075430 KLRC1P26715 233 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 TNNI2P48788 182 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 ZNF444Q8N0Y2 327 aaPredicted RBP18.49■□□□□ 0.55
CTDP1-201ENST00000075430 CALML4Q96GE6 196 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 CCT8L2Q96SF2 557 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 TLR10Q9BXR5 811 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 THAP9Q9H5L6 903 aa18.49■□□□□ 0.55
CTDP1-201ENST00000075430 BUB1BO60566 1050 aaPredicted RBP18.48■□□□□ 0.55
CTDP1-201ENST00000075430 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
CTDP1-201ENST00000075430 CXorf56Q9H5V9 222 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms