RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 ATP6V0A2Q9Y487 856 aa19.34■□□□□ 0.69
CLDN11-201ENST00000064724 TDP2O95551 362 aa19.33■□□□□ 0.69
CLDN11-201ENST00000064724 MTIF2P46199 727 aaKnown RBP19.33■□□□□ 0.69
CLDN11-201ENST00000064724 CLK2P49760 499 aaKnown RBP19.33■□□□□ 0.69
CLDN11-201ENST00000064724 MCM6Q14566 821 aa19.33■□□□□ 0.69
CLDN11-201ENST00000064724 CERS5Q8N5B7 392 aa19.33■□□□□ 0.69
CLDN11-201ENST00000064724 ZNHIT6Q9NWK9 470 aaKnown RBP19.33■□□□□ 0.69
CLDN11-201ENST00000064724 MYO6Q9UM54 1294 aa19.33■□□□□ 0.69
CLDN11-201ENST00000064724 CTAGE15A4D2H0 777 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 CTAGE8P0CG41 777 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 LONRF2Q1L5Z9 754 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 FOXR2Q6PJQ5 311 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 CTAGE6Q86UF2 777 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 CTAGE4Q8IX94 777 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 GUF1Q8N442 669 aaKnown RBP19.33■□□□□ 0.68
CLDN11-201ENST00000064724 RAD54LQ92698 747 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 EEF2KMTQ96G04 330 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 SLC39A2Q9NP94 309 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 TRIM10Q9UDY6 481 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 GUCA1BQ9UMX6 200 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 ABCB11O95342 1321 aa19.33■□□□□ 0.68
CLDN11-201ENST00000064724 EIF3CLB5ME19 914 aaKnown RBP19.32■□□□□ 0.68
CLDN11-201ENST00000064724 SHMT1P34896 483 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 CYLC1P35663 651 aaPredicted RBP19.32■□□□□ 0.68
CLDN11-201ENST00000064724 TMEM119Q4V9L6 283 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 TRAPPC11Q7Z392 1133 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 MTMR8Q96EF0 704 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 EIF3CQ99613 913 aaKnown RBP19.32■□□□□ 0.68
CLDN11-201ENST00000064724 GPCPD1Q9NPB8 672 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 MAP2K7O14733 419 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 PPP1R11O60927 126 aaPredicted RBP19.32■□□□□ 0.68
CLDN11-201ENST00000064724 TUBBP07437 444 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 HNRNPH3P31942 346 aaKnown RBP19.32■□□□□ 0.68
CLDN11-201ENST00000064724 KLK7P49862 253 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 EHHADHQ08426 723 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 GPATCH4Q5T3I0 446 aaKnown RBP19.32■□□□□ 0.68
CLDN11-201ENST00000064724 HPS3Q969F9 1004 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 CDK5RAP3Q96JB5 506 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 LRRC27Q9C0I9 530 aa19.32■□□□□ 0.68
CLDN11-201ENST00000064724 RIMBP2O15034 1052 aa19.31■□□□□ 0.68
CLDN11-201ENST00000064724 EIF6P56537 245 aaKnown RBP19.31■□□□□ 0.68
CLDN11-201ENST00000064724 PSMD2Q13200 908 aa19.31■□□□□ 0.68
CLDN11-201ENST00000064724 FKBP15Q5T1M5 1219 aa19.31■□□□□ 0.68
CLDN11-201ENST00000064724 KRT79Q5XKE5 535 aa19.31■□□□□ 0.68
CLDN11-201ENST00000064724 CLEC10AQ8IUN9 316 aa19.31■□□□□ 0.68
CLDN11-201ENST00000064724 EHBP1Q8NDI1 1231 aa19.31■□□□□ 0.68
CLDN11-201ENST00000064724 NHEJ1Q9H9Q4 299 aaPredicted RBP19.31■□□□□ 0.68
CLDN11-201ENST00000064724 USP40Q9NVE5 1235 aa19.31■□□□□ 0.68
CLDN11-201ENST00000064724 TFRCP02786 760 aaKnown RBP19.3■□□□□ 0.68
CLDN11-201ENST00000064724 BEND6Q5SZJ8 279 aaPredicted RBP19.3■□□□□ 0.68
CLDN11-201ENST00000064724 CCDC122Q5T0U0 273 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 PAPD7Q5XG87 772 aaKnown RBP19.3■□□□□ 0.68
CLDN11-201ENST00000064724 HHIPL2Q6UWX4 724 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 PNKPQ96T60 521 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 POTEMA6NI47 508 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 NKRFO15226 690 aaKnown RBP eCLIP19.3■□□□□ 0.68
CLDN11-201ENST00000064724 KRT86O43790 486 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 FGFR1OPO95684 399 aaKnown RBP19.3■□□□□ 0.68
CLDN11-201ENST00000064724 TNNI2P48788 182 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 MRPL12P52815 198 aaKnown RBP19.3■□□□□ 0.68
CLDN11-201ENST00000064724 LRRC63Q05C16 580 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 VWA3BQ502W6 1294 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 SNX29Q8TEQ0 813 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 CUL5Q93034 780 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 NUDT12Q9BQG2 462 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 ZC3H12CQ9C0D7 883 aaKnown RBP19.3■□□□□ 0.68
CLDN11-201ENST00000064724 SIK3Q9Y2K2 1263 aa19.3■□□□□ 0.68
CLDN11-201ENST00000064724 QSER1Q2KHR3 1735 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 F8W031 263 aaPredicted RBP19.29■□□□□ 0.68
CLDN11-201ENST00000064724 SMC1AQ14683 1233 aaKnown RBP19.29■□□□□ 0.68
CLDN11-201ENST00000064724 MSL3Q8N5Y2 521 aaKnown RBP19.29■□□□□ 0.68
CLDN11-201ENST00000064724 HAS1Q92839 578 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 PURBQ96QR8 312 aaKnown RBP19.29■□□□□ 0.68
CLDN11-201ENST00000064724 PLAGL2Q9UPG8 496 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 ZBTB5O15062 677 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 GCFC2P16383 781 aaKnown RBP19.29■□□□□ 0.68
CLDN11-201ENST00000064724 SEPT2Q15019 361 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 TTBK2Q6IQ55 1244 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 CDC42EP5Q6NZY7 148 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 DYMQ7RTS9 669 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 DDX12PQ92771 950 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 JAKMIP2Q96AA8 810 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 EHD4Q9H223 541 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 NDST4Q9H3R1 872 aa19.29■□□□□ 0.68
CLDN11-201ENST00000064724 DDX25Q9UHL0 483 aaKnown RBP19.29■□□□□ 0.68
CLDN11-201ENST00000064724 UBE2SQ16763 222 aa19.28■□□□□ 0.68
CLDN11-201ENST00000064724 APOBEC3HQ6NTF7 200 aaKnown RBP19.28■□□□□ 0.68
CLDN11-201ENST00000064724 KCNK18Q7Z418 384 aa19.28■□□□□ 0.68
CLDN11-201ENST00000064724 KIAA1328Q86T90 577 aa19.28■□□□□ 0.68
CLDN11-201ENST00000064724 CCDC84Q86UT8 332 aaPredicted RBP19.28■□□□□ 0.68
CLDN11-201ENST00000064724 LACRTQ9GZZ8 138 aa19.28■□□□□ 0.68
CLDN11-201ENST00000064724 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
CLDN11-201ENST00000064724 AFF2P51816 1311 aa19.27■□□□□ 0.68
CLDN11-201ENST00000064724 RCCD1A6NED2 376 aa19.27■□□□□ 0.68
CLDN11-201ENST00000064724 ERLIN1O75477 346 aa19.27■□□□□ 0.68
CLDN11-201ENST00000064724 IPO7O95373 1038 aaKnown RBP19.27■□□□□ 0.68
CLDN11-201ENST00000064724 MAN2A1Q16706 1144 aa19.27■□□□□ 0.68
CLDN11-201ENST00000064724 HYIQ5T013 277 aa19.27■□□□□ 0.68
CLDN11-201ENST00000064724 LRRC55Q6ZSA7 311 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms