RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PVALEFA0A1B0GWK0 134 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 A0A1W2PQC6 194 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 SOWAHDA6NJG2 315 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 F5H6K3 240 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 NDUFB10O96000 172 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 GH2P01242 217 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
VAMP3-201ENST00000054666 EN1Q05925 392 aaPredicted RBP9.24□□□□□ -0.93
VAMP3-201ENST00000054666 KLRC3Q07444 240 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 MCM6Q14566 821 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 TSR1Q2NL82 804 aaKnown RBP9.24□□□□□ -0.93
VAMP3-201ENST00000054666 COBLL1Q53SF7 1204 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 SYDE2Q5VT97 1194 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 RTKN2Q8IZC4 609 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 OGFOD1Q8N543 542 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 DESI2Q9BSY9 194 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 CGNQ9P2M7 1197 aaKnown RBP9.24□□□□□ -0.93
VAMP3-201ENST00000054666 SYNPO2Q9UMS6 1093 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 PCDHA12Q9UN75 941 aa9.24□□□□□ -0.93
VAMP3-201ENST00000054666 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 YDJCA8MPS7 323 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 SLC26A4O43511 780 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 FGFR1OPO95684 399 aaKnown RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 BMP3P12645 472 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 CASQ1P31415 396 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 MTIF2P46199 727 aaKnown RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 DNM2P50570 870 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 PMS1P54277 932 aaKnown RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 GNG11P61952 73 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 TRAF1Q13077 416 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 TMEM119Q4V9L6 283 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 HAUS3Q68CZ6 603 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 RSBN1LQ6PCB5 846 aaPredicted RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 MOXD1Q6UVY6 613 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 FBXO11Q86XK2 927 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 TMTC1Q8IUR5 882 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 SLFN12Q8IYM2 578 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 TTLL6Q8N841 843 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 CNOT6LQ96LI5 555 aaKnown RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 PNMA5Q96PV4 448 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 BMP2KQ9NSY1 1161 aaPredicted RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 ABHD10Q9NUJ1 306 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 BLOC1S4Q9NUP1 217 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L15C9J2P7 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L13C9JLJ4 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L11C9JVI0 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L18D6R9N7 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L22D6RA61 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L17D6RBQ6 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L19D6RCP7 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L20D6RJB6 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 URI1O94763 535 aaPredicted RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 FCER1AP12319 257 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 IDEP14735 1019 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 FXR1P51114 621 aaKnown RBP eCLIP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP11P51784 963 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L24Q0WX57 530 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 STK4Q13043 487 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 DLGAP5Q15398 846 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 SHROOM1Q2M3G4 852 aaPredicted RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 TRIM65Q6PJ69 517 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 USP17L6PQ6QN14 398 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 CYP26C1Q6V0L0 522 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 DYMQ7RTS9 669 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 LARGE2Q8N3Y3 721 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 MB21D1Q8N884 522 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 MNS1Q8NEH6 495 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 PRMT6Q96LA8 375 aaPredicted RBP9.23□□□□□ -0.93
VAMP3-201ENST00000054666 CAMKK2Q96RR4 588 aa9.23□□□□□ -0.93
VAMP3-201ENST00000054666 SPDYE2BA6NHP3 402 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 MYMKA6NI61 221 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 TCP10L2B9ZVM9 353 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 KIF5CO60282 957 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 FOSP01100 380 aaPredicted RBP9.22□□□□□ -0.93
VAMP3-201ENST00000054666 SPDYE6P0CI01 402 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 FECHP22830 423 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 KRT9P35527 623 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 USH1GQ495M9 461 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 GLIPR1L2Q4G1C9 344 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 FKBP15Q5T1M5 1219 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 KIAA0895Q8NCT3 520 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 PSMD1Q99460 953 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 TSG101Q99816 390 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 TUBGCP2Q9BSJ2 902 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 GOPCQ9HD26 462 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 SLC39A2Q9NP94 309 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
VAMP3-201ENST00000054666 CLRN2A0PK11 232 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 EDIL3O43854 480 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 STAT2P52630 851 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 ARHGAP4P98171 946 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 PSMD2Q13200 908 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.93
VAMP3-201ENST00000054666 MTF1Q14872 753 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 ARHGAP29Q52LW3 1261 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 RAD9BQ6WBX8 426 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 IRF2BP1Q8IU81 584 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms