RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 ABCC12Q96J65 1359 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 ZNF445P59923 1031 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 UAP1Q16222 522 aaPredicted RBP12.17□□□□□ -0.46
RGPD5-201ENST00000016946 FBF1Q8TES7 1133 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 PTPRMP28827 1452 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 ZBTB5O15062 677 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 SPATA1Q5VX52 437 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 NT5C1BQ96P26 610 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 ABCA9Q8IUA7 1624 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 ABCB4P21439 1286 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 NR2F2P24468 414 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 ALDH3A1P30838 453 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 NDUFA8P51970 172 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
RGPD5-201ENST00000016946 LMTK2Q8IWU2 1503 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 MXRA7P84157 204 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 STXBP2Q15833 593 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 TMEM206Q9H813 350 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 PCDHA5Q9Y5H7 936 aa12.17□□□□□ -0.46
RGPD5-201ENST00000016946 BPIFB4P59827 614 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 ZBTB16Q05516 673 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 NECTIN1Q15223 517 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 SF3B3Q15393 1217 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 HADHQ16836 314 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 SCYL2Q6P3W7 929 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 TMTC3Q6ZXV5 915 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 SUGT1Q9Y2Z0 365 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 RCSD1Q6JBY9 416 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 KIAA1841Q6NSI8 718 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 KCNK9Q9NPC2 374 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 PTPRUQ92729 1446 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 GLI2P10070 1586 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 STAM2O75886 525 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 SNAP25P60880 206 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 NSFP46459 744 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 TRIM50Q86XT4 487 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 UBLCP1Q8WVY7 318 aaPredicted RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 RMDN3Q96TC7 470 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 RNF146Q9NTX7 359 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 POLR2FP61218 127 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 CCDC105Q8IYK2 499 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 ZNF34Q8IZ26 560 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 SLC44A5Q8NCS7 719 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 HERC5Q9UII4 1024 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 MEIS1O00470 390 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 RRP9O43818 475 aaKnown RBP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 GTF2F1P35269 517 aaKnown RBP eCLIP12.16□□□□□ -0.46
RGPD5-201ENST00000016946 PIK3CAP42336 1068 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 PTK2Q05397 1052 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 TRIM31Q9BZY9 425 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
RGPD5-201ENST00000016946 ARHGEF37A1IGU5 675 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 PPP2R5DQ14738 602 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 PDZD4Q76G19 769 aaPredicted RBP12.15□□□□□ -0.46
RGPD5-201ENST00000016946 UTP11Q9Y3A2 253 aaKnown RBP12.15□□□□□ -0.46
RGPD5-201ENST00000016946 SLFN14P0C7P3 912 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 DAAM2Q86T65 1068 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 METTL23Q86XA0 190 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 PLA2G12BQ9BX93 195 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 FEZ2Q9UHY8 353 aaPredicted RBP12.15□□□□□ -0.46
RGPD5-201ENST00000016946 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 MFAP3P55082 362 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 RIC8AQ9NPQ8 531 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 NKIRAS1Q9NYS0 192 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 AMFRQ9UKV5 643 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 HOXD10P28358 340 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 SLC15A2Q16348 729 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 STRIP1Q5VSL9 837 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 PRPF38AQ8NAV1 312 aaKnown RBP12.15□□□□□ -0.46
RGPD5-201ENST00000016946 LINC00116Q8NCU8 138 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 CACTINQ8WUQ7 758 aaKnown RBP12.15□□□□□ -0.46
RGPD5-201ENST00000016946 MYL1P05976 194 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 IVLP07476 585 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 FDX1P10109 184 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 PSMC2P35998 433 aaKnown RBP12.15□□□□□ -0.46
RGPD5-201ENST00000016946 CFAP157Q5JU67 520 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 SMC6Q96SB8 1091 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 FAM49AQ9H0Q0 323 aaPredicted RBP12.15□□□□□ -0.46
RGPD5-201ENST00000016946 SH3GLB2Q9NR46 395 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 RAB20Q9NX57 234 aa12.15□□□□□ -0.46
RGPD5-201ENST00000016946 H2AFZP0C0S5 128 aa12.15□□□□□ -0.47
RGPD5-201ENST00000016946 H2AFVQ71UI9 128 aa12.15□□□□□ -0.47
RGPD5-201ENST00000016946 FAM186BQ8IYM0 893 aa12.15□□□□□ -0.47
RGPD5-201ENST00000016946 KRT222Q8N1A0 295 aa12.15□□□□□ -0.47
RGPD5-201ENST00000016946 FAM167AQ96KS9 214 aa12.15□□□□□ -0.47
RGPD5-201ENST00000016946 JAK3P52333 1124 aa12.14□□□□□ -0.47
RGPD5-201ENST00000016946 EVCP57679 992 aa12.14□□□□□ -0.47
RGPD5-201ENST00000016946 MYL7Q01449 175 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms