RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TEX11Q8IYF3 940 aa6.59□□□□□ -1.35
VPS13D-201ENST00000011700 IQGAP3Q86VI3 1631 aa6.59□□□□□ -1.36
VPS13D-201ENST00000011700 ATP5J2-PTCD1G3V325 749 aa6.59□□□□□ -1.36
VPS13D-201ENST00000011700 PTCD1O75127 700 aaKnown RBP6.59□□□□□ -1.36
VPS13D-201ENST00000011700 ETF1P62495 437 aaKnown RBP6.59□□□□□ -1.36
VPS13D-201ENST00000011700 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.59□□□□□ -1.36
VPS13D-201ENST00000011700 PGRMC1O00264 195 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 GCNT3O95395 438 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 POLR3EQ9NVU0 708 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 DYTNA2CJ06 578 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 CHUKO15111 745 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 AK2P54819 239 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 GTF3C6Q969F1 213 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 USP26Q9BXU7 913 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 NOD1Q9Y239 953 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 OATP04181 439 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 TTC38Q5R3I4 469 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 RARS2Q5T160 578 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 ARL6IP4Q66PJ3 421 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 NHEJ1Q9H9Q4 299 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 ADD3Q9UEY8 706 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 SUN2Q9UH99 717 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 MYOM2P54296 1465 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 EXOC3O60645 756 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 GSNP06396 782 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 TAC1P20366 129 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 MYOCDQ8IZQ8 938 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 PARVBQ9HBI1 364 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 RFX7Q2KHR2 1363 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 GOLGA8FQ08AF8 430 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 GOLGA8DPQ0D2H9 430 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 ADCY8P40145 1251 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 ZCRB1Q8TBF4 217 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 UIMC1Q96RL1 719 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 MTA3Q9BTC8 594 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 KIAA1586Q9HCI6 787 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 INTS9Q9NV88 658 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 SERPINA10Q9UK55 444 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 NFE2L3Q9Y4A8 694 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 PLEKHG2Q9H7P9 1386 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 TRPM1Q7Z4N2 1603 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 KRT38O76015 456 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 CHMLP26374 656 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 MAGEA1P43355 309 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 TAP1Q03518 808 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 KBTBD3Q8NAB2 608 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 KLHDC4Q8TBB5 520 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 MYO1FO00160 1098 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 CAPN9O14815 690 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 GPC4O75487 556 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 AP2B1P63010 937 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 FKBP3Q00688 224 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 PRUNE1Q86TP1 453 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 C19orf60Q96EN9 201 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 ASPSCR1Q9BZE9 553 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 HECW2Q9P2P5 1572 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 CTNND2Q9UQB3 1225 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 NCAPD2Q15021 1401 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 MCF2P10911 925 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 MARCKSP29966 332 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 ISM2Q6H9L7 571 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 SCG3Q8WXD2 468 aaKnown RBP6.58□□□□□ -1.36
VPS13D-201ENST00000011700 USP6NLQ92738 828 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 CEP19Q96LK0 163 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 EVPLQ92817 2033 aa6.58□□□□□ -1.36
VPS13D-201ENST00000011700 LRRIQ3A6PVS8 624 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-201ENST00000011700 FAM9CQ8IZT9 166 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 PDIK1LQ8N165 341 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 HNRNPCL2B2RXH8 293 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 H0Y626 953 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 TRIM16O95361 564 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 OAS2P29728 719 aaKnown RBP6.57□□□□□ -1.36
VPS13D-201ENST00000011700 AASDHQ4L235 1098 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-201ENST00000011700 POTEAQ6S8J7 498 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 TEX9Q8N6V9 391 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 BCAS4Q8TDM0 211 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 CYP26B1Q9NR63 512 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 PFASO15067 1338 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 EEF1DP29692 281 aaKnown RBP6.57□□□□□ -1.36
VPS13D-201ENST00000011700 KCNJ6P48051 423 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 FBXL13Q8NEE6 735 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 PLBD2Q8NHP8 589 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 PANX2Q96RD6 677 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 CCDC8Q9H0W5 538 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-201ENST00000011700 ZBTB40Q9NUA8 1239 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 NOP53Q9NZM5 478 aaKnown RBP6.57□□□□□ -1.36
VPS13D-201ENST00000011700 SMCO2A6NFE2 343 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 IL2RBP14784 551 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 FAM160B1Q5W0V3 765 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 LPIN2Q92539 896 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 RMDN1Q96DB5 314 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 C10orf88Q9H8K7 445 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 USP40Q9NVE5 1235 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 UVRAGQ9P2Y5 699 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 FAM83GA6ND36 823 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 TJP3O95049 919 aa6.57□□□□□ -1.36
VPS13D-201ENST00000011700 IQCB1Q15051 598 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms