RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 Q3C1V9 767 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 TMTC3Q6ZXV5 915 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 CCDC127Q96BQ5 260 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 BCORL1Q5H9F3 1711 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 VAV2P52735 878 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 SECISBP2LQ93073 1101 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 PARP2Q9UGN5 583 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 ARHGEF37A1IGU5 675 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 DPEP1P16444 411 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 TMEM206Q9H813 350 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 MST1RQ04912 1400 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 WDR19Q8NEZ3 1342 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 SLU7O95391 586 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 TUBBP07437 444 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 GNAT1P11488 350 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 ZNF75DP51815 510 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 JAK3P52333 1124 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 RCAN1P53805 252 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 PPP2R3AQ06190 1150 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 CFAP58Q5T655 872 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 PPP1R18Q6NYC8 613 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 MICALCLQ6ZW33 695 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 RAVER2Q9HCJ3 691 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 ARFGAP3Q9NP61 516 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 NLRC4Q9NPP4 1024 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 FER1L4A9Z1Z3 1794 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 MYL1P05976 194 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 ZNF365Q70YC5 407 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 PRPF38AQ8NAV1 312 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 NSUN6Q8TEA1 469 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 GJA10Q969M2 543 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 ANKRD36BP1Q96IX9 119 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 GSDMAQ96QA5 445 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 RMDN3Q96TC7 470 aa11.39□□□□□ -0.59
NIPAL3-201ENST00000003912 NDC80O14777 642 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 CAPN9O14815 690 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 RPS12P25398 132 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 CCDC51Q96ER9 411 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 CEP95Q96GE4 821 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 CSF1RP07333 972 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 HOXA7P31268 230 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 SNAP25P60880 206 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 CACTINQ8WUQ7 758 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 FAM167AQ96KS9 214 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 RNF146Q9NTX7 359 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 PNPLA7Q6ZV29 1317 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L15C9J2P7 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L13C9JLJ4 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L11C9JVI0 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L18D6R9N7 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L22D6RA61 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L17D6RBQ6 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L19D6RCP7 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L20D6RJB6 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 OPA1O60313 960 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 PIK3CAP42336 1068 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 TERF1P54274 439 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 RNASELQ05823 741 aaKnown RBP11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 USP17L24Q0WX57 530 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 METTL23Q86XA0 190 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 TBC1D10CQ8IV04 446 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 CCDC63Q8NA47 563 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 MYL3P08590 195 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 PDE6CP51160 858 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 TUBB2AQ13885 445 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 RASA3Q14644 834 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 SYT10Q6XYQ8 523 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 SND1Q7KZF4 910 aaKnown RBP eCLIP11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 NAPGQ99747 312 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 TUBB2BQ9BVA1 445 aa11.38□□□□□ -0.59
NIPAL3-201ENST00000003912 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 NDUFA8P51970 172 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 LACTBP83111 547 aaPredicted RBP11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 ATG9AQ7Z3C6 839 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 F5H6K3 240 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 ENTPD3O75355 529 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 MYCP01106 439 aaPredicted RBP11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 POLR2BP30876 1174 aaKnown RBP11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 KLRC3Q07444 240 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 NR5A1Q13285 461 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 MFSD14CQ5VZR4 134 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 CCDC25Q86WR0 208 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 PCDHA6Q9UN73 950 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 PCDHA8Q9Y5H6 950 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 LRRIQ1Q96JM4 1722 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 USP32Q8NFA0 1604 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 NEDD4P46934 1319 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 ZNF445P59923 1031 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms