RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pias4Q9JM05 507 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Phtf1Q9QZ09 761 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Kif24Q6NWW5 1356 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Becn1O88597 448 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Psd3Q2PFD7 1037 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cnpy1Q4VAB4 94 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Birc2Q62210 612 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Scn4bQ7M729 228 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Luc7l2Q7TNC4 392 aaKnown RBP10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ccser1Q8C0C4 895 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Homer3Q99JP6 356 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Fam90a1bQ9D4F3 419 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Spata1Q9D5R4 444 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Adamts13Q769J6 1426 aa10.14□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Prr29B1ARI9 187 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Clip3B9EHT4 547 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ap1b1O35643 943 aaKnown RBP10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 UcmaQ14BU0 138 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Eid3Q3V124 375 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm525Q3V3I5 90 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Colgalt2Q6NVG7 625 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Slc39a10Q6P5F6 833 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Alkbh8Q80Y20 664 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Pias2Q8C5D8 621 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ccdc113Q8C5T8 377 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 C8aQ8K182 587 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Trappc12Q8K2L8 797 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Olfr351Q8VGK1 310 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zfand2bQ91X58 257 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Pcdhb16Q91Y03 802 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 CatsperzQ9CQP8 194 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Krt34Q9D646 392 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Lbx2Q9WUN8 195 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Tulp4Q9JIL5 1547 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ifit1bl1D3Z6F0 470 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Atp5iQ06185 71 aaKnown RBP10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Emc10Q3TAS6 258 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Mex3bQ69Z36 601 aaKnown RBP10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cpa1Q7TPZ8 419 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Vcpip1Q8CDG3 1220 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gatad2aQ8CHY6 629 aaKnown RBP10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Pak2Q8CIN4 524 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ak5Q920P5 562 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Tdrd12Q9CWU0 1215 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ripk4Q9ERK0 786 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 PalmQ9Z0P4 383 aa10.13□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zfp266E9Q2S7 604 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Pot1bH7BX60 640 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Diaph1O08808 1255 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Rabep1O35551 862 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 MutP16332 748 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 TchpQ3TVW5 497 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cstf2Q8BIQ5 580 aaKnown RBP10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gprasp2Q8BUY8 826 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Mill2Q8HWE5 355 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 AnlnQ8K298 1121 aaKnown RBP10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Emid1Q91VF5 444 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Xpo5Q924C1 1204 aaKnown RBP10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 TnmdQ9EP64 317 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 HnrnpfQ9Z2X1 415 aaKnown RBP10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Nwd1A6H603 1563 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Lonrf1D3YY23 762 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zfp846G3X996 541 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Gm3415J3QMS8 315 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Socs5O54928 536 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Il4rP16382 810 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 GnpatP98192 678 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cnnm3Q32NY4 713 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Grik1Q60934 836 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Tnfaip2Q61333 691 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Utp14aQ640M1 767 aaKnown RBP10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Serpinb3dQ6UKZ0 387 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zpbp2Q6X786 326 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Moxd2Q7TT41 619 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ccdc159Q8C963 411 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Q8CC96 669 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ttc39cQ8VE09 580 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Slc12a5Q91V14 1138 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Armc10Q9D0L7 306 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 MaddQ80U28 1577 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Unc13bQ9Z1N9 1602 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Col14a1Q80X19 1797 aa10.12□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Usp47Q8BY87 1376 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Sclt1G5E861 688 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Fyb1O35601 819 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Xirp1O70373 1129 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 ClppO88696 272 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Apaf1O88879 1249 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Pi4k2aQ2TBE6 479 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Fam193bQ3U2K0 892 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ceacam5Q3UKK2 947 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Foxn3Q499D0 457 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Pnma5Q5DTT8 618 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Taok1Q5F2E8 1001 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 P4ha1Q60715 534 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Bag1Q60739 355 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Igbp1Q61249 340 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cypt2Q6P924 180 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Fam160b2Q80YR2 744 aa10.11□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ccdc68Q8BVC4 333 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms