RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Actr5Q80US4 605 aaKnown RBP9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Msantd4Q91YU3 345 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ercc6l2Q9JIM3 1537 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ccdc185Q3V118 621 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Pank4Q80YV4 820 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Rfc4Q99J62 364 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 NumbQ9QZS3 653 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 ErmnQ5EBJ4 281 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Noxred1Q9D3S5 366 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Nfe2l3Q9WTM4 660 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 1700006A11RikB9EHI3 544 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Gm28043E0CXC2 719 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Stxbp3Q60770 592 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Trim32Q8CH72 655 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Spats2Q8K1N4 545 aaKnown RBP9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Thoc1Q8R3N6 657 aaKnown RBP9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Bbs5Q9CZQ9 341 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Sept3Q9Z1S5 350 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Krt27Q9Z320 448 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Fndc1E9Q043 1732 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cd3dP04235 173 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ftl1P29391 183 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Sept1P42209 366 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Fgd5Q80UZ0 1219 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Bmp2kQ91Z96 1138 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Arhgap33Q80YF9 1305 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Med23Q80YQ2 1367 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Abcb5B5X0E4 1255 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Igfbp6P47880 238 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Lrriq3Q14DL3 633 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Proser2Q8C5R2 471 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Vmn1r213Q8R278 384 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Rabgap1A2AWA9 1064 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Wbp11Q923D5 641 aaKnown RBP9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Prc1Q99K43 603 aaKnown RBP9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Nuf2Q99P69 463 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Q9DAQ4 598 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Kif9Q9WV04 790 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Myh11O08638 1972 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ifi207E9Q3L4 978 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Vwa3bJ9JI28 736 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Myl1P05977 188 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ccdc157Q5SPX1 718 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Stxbp2Q64324 593 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Stk39Q9Z1W9 556 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Terb1Q8C0V1 768 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Lonp1Q8CGK3 949 aaKnown RBP9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Pstpip2Q99M15 334 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ppp1r12aQ9DBR7 1029 aaKnown RBP9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Riok3Q9DBU3 519 aaKnown RBP9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Kif14L0N7N1 1674 aaKnown RBP9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Phldb3E9QAF4 648 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Klhl20Q8VCK5 604 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cyp4x1Q6A152 507 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Elmo3Q8BYZ7 720 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Znf830Q8R1N0 363 aaKnown RBP9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 MypopQ8R4U1 393 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Actn2Q9JI91 894 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ccdc13D3YV10 709 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Gm4841E9QAA8 417 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cog7Q3UM29 770 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Acot3Q9QYR7 432 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Nr5a1P33242 462 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Skap2Q3UND0 358 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Vps37bQ8R0J7 285 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Thap12Q9CUX1 758 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Gon4lQ9DB00 2260 aa9.57□□□□□ -0.88
Ttc28-201ENSMUST00000040111 1700113H08RikE9Q9Q5 327 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Nedd4P46935 887 aaKnown RBP9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cracr2aQ3UP38 310 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Rc3h1Q4VGL6 1130 aaKnown RBP9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Krt14Q61781 484 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Nucks1Q80XU3 234 aaKnown RBP9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Amz1Q8BVF9 502 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cxcl11Q9JHH5 100 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Usp42B2RQC2 1324 aaKnown RBP9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Aox1O54754 1333 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Fam207aP58468 219 aaKnown RBP9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Mark2Q05512 776 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cct8l1Q80YT3 562 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Kcnk13Q8R1P5 405 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Krt34Q9D646 392 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Abt1Q9QYL7 269 aaKnown RBP9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Gm15262A0A140LIQ5 728 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cnpy3Q9DAU1 276 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Copb1Q9JIF7 953 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Taf4bG5E8Z2 855 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Esyt2Q3TZZ7 845 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Trim80Q3V061 624 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Arhgef7Q9ES28 862 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Nxf2Q4ZGD8 691 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Pdzph1Q8BGR1 1238 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Rbbp5Q8BX09 538 aaKnown RBP9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Lman1lQ8VCD3 505 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ttll1Q91V51 423 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Slc44a4Q91VA1 707 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Atp6v0a4Q920R6 833 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Capn15Q9JLG8 1095 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Homer2Q9QWW1 354 aa9.56□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Aox2Q5SGK3 1345 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms