RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Vps41Q5KU39 853 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Sept9Q80UG5 583 aa14.01□□□□□ -0.17
Clcn3-201ENSMUST00000004430 XlrP05531 208 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Prpf38aQ4FK66 312 aaKnown RBP14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Prkag3Q8BGM7 489 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Zkscan3Q91VW9 553 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Zranb2Q9R020 330 aaKnown RBP14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ankrd2Q9WV06 328 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cyp19a1P28649 503 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Olfr121Q5CZY0 321 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ccdc92bQ5SUE3 299 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ezh2Q61188 746 aaKnown RBP14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Haus6Q6NV99 933 aaKnown RBP14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Aimp1P31230 310 aaKnown RBP14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Psmc2P46471 433 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Nhej1Q3KNJ2 295 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Znf827Q505G8 1078 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Kiaa1211Q5PR69 1207 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ttll4Q80UG8 1193 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Tmem134Q8R0J4 195 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 AticQ9CWJ9 592 aaKnown RBP14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cetn2Q9R1K9 172 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 DexiQ9WUQ7 95 aa14□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ca8P28651 291 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Zfyve27Q3TXX3 415 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Alx1Q8C8B0 326 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Znf394Q9Z1D9 521 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Prr5lA2AVJ5 370 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Rexo5D3YW29 759 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Nkx2-5P42582 318 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Fdx1P46656 188 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Rps8P62242 208 aaKnown RBP13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Foxn3Q499D0 457 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Mum1l1Q4VA55 681 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gm5169Q5M8P2 212 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Q8C1R3 189 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 3830403N18RikQ9D6C3 208 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gm6121L7MUF1 212 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 MlxipQ2VPU4 917 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Meis1Q60954 390 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Haus4Q8BFT2 363 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Susd4Q8BH32 490 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Tekt2Q922G7 430 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Dhx58Q99J87 678 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ttc14Q9CSP9 761 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 SarnpQ9D1J3 210 aaKnown RBP13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cxcl11Q9JHH5 100 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Itga2bQ9QUM0 1033 aa13.99□□□□□ -0.17
Clcn3-201ENSMUST00000004430 1700016G14RikA0A286YCZ6 238 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Rsrc2A2RTL5 376 aaKnown RBP13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 H2afzP0C0S6 128 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Rpl13P47963 211 aaKnown RBP13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ncf1Q09014 390 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 H2afvQ3THW5 128 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Krt14Q61781 484 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Krt12Q64291 487 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Pramel6Q810Y9 485 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Golph3Q9CRA5 298 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Mxra7Q9CZH7 178 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Dydc2Q9D3X8 139 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Paip2Q9D6V8 124 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ccdc91Q9D8L5 442 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Eef1gQ9D8N0 437 aaKnown RBP13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Mrpl12Q9DB15 201 aaKnown RBP13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Apol10bG3X9K7 334 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Serpinb6eI7HJI3 429 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ankrd13dQ6PD24 605 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Sestd1Q80UK0 696 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Q91WD4 421 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Cfap57Q9D180 1249 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Stag1Q9D3E6 1258 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Nme9A0A1L1SUL6 329 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Prl2c3P04768 224 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Bsdc1Q80Y55 427 aa13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Eif3cQ8R1B4 911 aaKnown RBP13.98□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Casp12O08736 419 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Stag2O35638 1231 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 PltpP55065 493 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Smc6Q924W5 1097 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 AvenQ9D9K3 342 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Prss40A6H6T1 365 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gm10110D3Z5M2 615 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 GabrdP22933 449 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Hmgb2P30681 210 aaKnown RBP13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 IvlP48997 467 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Slc9a2Q3ZAS0 814 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Gucy2fQ5SDA5 1108 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 AbraQ8BUZ1 375 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Proser2Q8C5R2 471 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ces1Q8VCC2 565 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Serpinb12Q9D7P9 423 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Tacc3Q9JJ11 631 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Angptl3Q9R182 455 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Phlpp1Q8CHE4 1687 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Ano3A2AHL1 981 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 LdhaP06151 332 aaKnown RBP13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 RargP18911 458 aaKnown RBP13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Nr2f2P43135 414 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 PcQ05920 1178 aa13.97□□□□□ -0.17
Clcn3-201ENSMUST00000004430 Map3k12Q60700 888 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms