RNA–Protein interactions for RNA: ENST00000642100.1

CASC19-279, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-279ENST00000642100 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.06□□□□□ -0.16
CASC19-279ENST00000642100 HOMEZQ8IX15 550 aa14.05□□□□□ -0.16
CASC19-279ENST00000642100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.03□□□□□ -0.16
CASC19-279ENST00000642100 LMOD2Q6P5Q4 547 aa14.02□□□□□ -0.17
CASC19-279ENST00000642100 EFCAB3Q8N7B9 438 aa14.01□□□□□ -0.17
CASC19-279ENST00000642100 DPY19L2Q6NUT2 758 aa13.96□□□□□ -0.17
CASC19-279ENST00000642100 KCNV2Q8TDN2 545 aa13.95□□□□□ -0.18
CASC19-279ENST00000642100 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
CASC19-279ENST00000642100 SOX12O15370 315 aa13.9□□□□□ -0.18
CASC19-279ENST00000642100 SLAIN1Q8ND83 568 aa13.9□□□□□ -0.18
CASC19-279ENST00000642100 BRPF1P55201 1214 aaPredicted RBP13.88□□□□□ -0.19
CASC19-279ENST00000642100 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
CASC19-279ENST00000642100 CADPS2Q86UW7 1296 aa13.86□□□□□ -0.19
CASC19-279ENST00000642100 PHF8Q9UPP1 1060 aa13.85□□□□□ -0.19
CASC19-279ENST00000642100 MS4A4AQ96JQ5 239 aa13.84□□□□□ -0.19
CASC19-279ENST00000642100 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
CASC19-279ENST00000642100 C3orf67Q6ZVT6 689 aa13.82□□□□□ -0.2
CASC19-279ENST00000642100 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
CASC19-279ENST00000642100 LCE2DQ5TA82 110 aaPredicted RBP13.8□□□□□ -0.2
CASC19-279ENST00000642100 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
CASC19-279ENST00000642100 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
CASC19-279ENST00000642100 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
CASC19-279ENST00000642100 ZC3H15Q8WU90 426 aaKnown RBP13.79□□□□□ -0.2
CASC19-279ENST00000642100 NEUROD2Q15784 382 aa13.78□□□□□ -0.2
CASC19-279ENST00000642100 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
CASC19-279ENST00000642100 G3V3G9 751 aa13.77□□□□□ -0.21
CASC19-279ENST00000642100 NLRP6P59044 892 aa13.77□□□□□ -0.21
CASC19-279ENST00000642100 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
CASC19-279ENST00000642100 E2F4Q16254 413 aa13.7□□□□□ -0.22
CASC19-279ENST00000642100 POTEMA6NI47 508 aa13.69□□□□□ -0.22
CASC19-279ENST00000642100 SLC24A3Q9HC58 644 aa13.69□□□□□ -0.22
CASC19-279ENST00000642100 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
CASC19-279ENST00000642100 TESPA1A2RU30 521 aaPredicted RBP13.67□□□□□ -0.22
CASC19-279ENST00000642100 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
CASC19-279ENST00000642100 SNPHO15079 494 aa13.66□□□□□ -0.22
CASC19-279ENST00000642100 ST18O60284 1047 aa13.65□□□□□ -0.22
CASC19-279ENST00000642100 SEMA3EO15041 775 aa13.63□□□□□ -0.23
CASC19-279ENST00000642100 SMYD5Q6GMV2 418 aa13.63□□□□□ -0.23
CASC19-279ENST00000642100 TMEM92Q6UXU6 159 aa13.63□□□□□ -0.23
CASC19-279ENST00000642100 ZMYND10O75800 440 aa13.59□□□□□ -0.23
CASC19-279ENST00000642100 PPP1R37O75864 691 aa13.57□□□□□ -0.24
CASC19-279ENST00000642100 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
CASC19-279ENST00000642100 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
CASC19-279ENST00000642100 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
CASC19-279ENST00000642100 KIF3CO14782 793 aa13.46□□□□□ -0.25
CASC19-279ENST00000642100 PDE4AP27815 886 aa13.46□□□□□ -0.25
CASC19-279ENST00000642100 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
CASC19-279ENST00000642100 AK7Q96M32 723 aa13.45□□□□□ -0.26
CASC19-279ENST00000642100 PCDH10Q9P2E7 1040 aa13.45□□□□□ -0.26
CASC19-279ENST00000642100 ARIH1Q9Y4X5 557 aaPredicted RBP13.45□□□□□ -0.26
CASC19-279ENST00000642100 C2orf72A6NCS6 295 aa13.43□□□□□ -0.26
CASC19-279ENST00000642100 LARP6Q9BRS8 491 aaKnown RBP13.43□□□□□ -0.26
CASC19-279ENST00000642100 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
CASC19-279ENST00000642100 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
CASC19-279ENST00000642100 ZMYND15Q9H091 742 aa13.4□□□□□ -0.26
CASC19-279ENST00000642100 MFSD10Q14728 455 aa13.39□□□□□ -0.27
CASC19-279ENST00000642100 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
CASC19-279ENST00000642100 EMP3P54852 163 aa13.38□□□□□ -0.27
CASC19-279ENST00000642100 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
CASC19-279ENST00000642100 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
CASC19-279ENST00000642100 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
CASC19-279ENST00000642100 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
CASC19-279ENST00000642100 PODXL2Q9NZ53 605 aa13.36□□□□□ -0.27
CASC19-279ENST00000642100 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
CASC19-279ENST00000642100 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
CASC19-279ENST00000642100 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
CASC19-279ENST00000642100 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
CASC19-279ENST00000642100 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
CASC19-279ENST00000642100 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
CASC19-279ENST00000642100 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.28
CASC19-279ENST00000642100 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
CASC19-279ENST00000642100 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
CASC19-279ENST00000642100 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
CASC19-279ENST00000642100 CAMK2BQ13554 666 aa13.31□□□□□ -0.28
CASC19-279ENST00000642100 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
CASC19-279ENST00000642100 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
CASC19-279ENST00000642100 KDM4CQ9H3R0 1056 aa13.3□□□□□ -0.28
CASC19-279ENST00000642100 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
CASC19-279ENST00000642100 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
CASC19-279ENST00000642100 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
CASC19-279ENST00000642100 ARSIQ5FYB1 569 aa13.27□□□□□ -0.29
CASC19-279ENST00000642100 SLC34A2O95436 690 aa13.26□□□□□ -0.29
CASC19-279ENST00000642100 FOXK1P85037 733 aa13.25□□□□□ -0.29
CASC19-279ENST00000642100 PLSCR2Q9NRY7 297 aa13.25□□□□□ -0.29
CASC19-279ENST00000642100 TRIM66O15016 1216 aa13.24□□□□□ -0.29
CASC19-279ENST00000642100 KHSRPQ92945 711 aaKnown RBP eCLIP13.24□□□□□ -0.29
CASC19-279ENST00000642100 PDE4DQ08499 809 aa13.23□□□□□ -0.29
CASC19-279ENST00000642100 ERBB3P21860 1342 aa13.22□□□□□ -0.29
CASC19-279ENST00000642100 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
CASC19-279ENST00000642100 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
CASC19-279ENST00000642100 DSG2Q14126 1118 aa13.22□□□□□ -0.29
CASC19-279ENST00000642100 PLPP6Q8IY26 295 aa13.21□□□□□ -0.29
CASC19-279ENST00000642100 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
CASC19-279ENST00000642100 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
CASC19-279ENST00000642100 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
CASC19-279ENST00000642100 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
CASC19-279ENST00000642100 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
CASC19-279ENST00000642100 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
CASC19-279ENST00000642100 NUDT7P0C024 238 aa13.14□□□□□ -0.31
CASC19-279ENST00000642100 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms