RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SETD5Q9C0A6 1442 aa26.34■■□□□ 1.81
PHGDH-232ENST00000641947 CROCC2H7BZ55 1655 aa26.32■■□□□ 1.8
PHGDH-232ENST00000641947 DAPK1P53355 1430 aa26.31■■□□□ 1.8
PHGDH-232ENST00000641947 WDR7Q9Y4E6 1490 aa26.31■■□□□ 1.8
PHGDH-232ENST00000641947 SAMD9LQ8IVG5 1584 aa26.3■■□□□ 1.8
PHGDH-232ENST00000641947 ABCC5O15440 1437 aa26.3■■□□□ 1.8
PHGDH-232ENST00000641947 GCC2Q8IWJ2 1684 aa26.29■■□□□ 1.8
PHGDH-232ENST00000641947 KCNH8Q96L42 1107 aa26.28■■□□□ 1.8
PHGDH-232ENST00000641947 HFM1A2PYH4 1435 aa26.28■■□□□ 1.8
PHGDH-232ENST00000641947 DHX57Q6P158 1386 aaKnown RBP26.26■■□□□ 1.79
PHGDH-232ENST00000641947 ZNF777Q9ULD5 760 aaPredicted RBP26.26■■□□□ 1.79
PHGDH-232ENST00000641947 ASXL2Q76L83 1435 aa26.26■■□□□ 1.79
PHGDH-232ENST00000641947 NAIPQ13075 1403 aa26.25■■□□□ 1.79
PHGDH-232ENST00000641947 ZEB1P37275 1124 aaPredicted RBP26.23■■□□□ 1.79
PHGDH-232ENST00000641947 ADGBQ8N7X0 1667 aa26.23■■□□□ 1.79
PHGDH-232ENST00000641947 ARHGAP5Q13017 1502 aa26.23■■□□□ 1.79
PHGDH-232ENST00000641947 CHIC2Q9UKJ5 165 aa26.23■■□□□ 1.79
PHGDH-232ENST00000641947 ABCA9Q8IUA7 1624 aa26.21■■□□□ 1.79
PHGDH-232ENST00000641947 AKNAQ7Z591 1439 aa26.21■■□□□ 1.79
PHGDH-232ENST00000641947 KDM6BO15054 1643 aa26.21■■□□□ 1.79
PHGDH-232ENST00000641947 ARHGEF5Q12774 1597 aa26.18■■□□□ 1.78
PHGDH-232ENST00000641947 PLCH2O75038 1416 aa26.17■■□□□ 1.78
PHGDH-232ENST00000641947 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
PHGDH-232ENST00000641947 RRP7BPQ9NSQ0 103 aa26.16■■□□□ 1.78
PHGDH-232ENST00000641947 SYCP2Q9BX26 1530 aa26.15■■□□□ 1.78
PHGDH-232ENST00000641947 CYB5RLQ6IPT4 315 aa26.15■■□□□ 1.78
PHGDH-232ENST00000641947 ROCK1Q13464 1354 aa26.14■■□□□ 1.78
PHGDH-232ENST00000641947 ARAP3Q8WWN8 1544 aa26.12■■□□□ 1.77
PHGDH-232ENST00000641947 NPM1P06748 294 aaKnown RBP eCLIP26.12■■□□□ 1.77
PHGDH-232ENST00000641947 ADGRL2O95490 1459 aa26.12■■□□□ 1.77
PHGDH-232ENST00000641947 SHANK2Q9UPX8 1470 aa26.12■■□□□ 1.77
PHGDH-232ENST00000641947 MAPKBP1O60336 1514 aa26.11■■□□□ 1.77
PHGDH-232ENST00000641947 HNRNPMP52272 730 aaKnown RBP eCLIP26.1■■□□□ 1.771e-6■■■■□ 22.8
PHGDH-232ENST00000641947 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
PHGDH-232ENST00000641947 ABCC1P33527 1531 aa26.08■■□□□ 1.77
PHGDH-232ENST00000641947 CCDC141Q6ZP82 1450 aa26.07■■□□□ 1.76
PHGDH-232ENST00000641947 NCOA1Q15788 1441 aa26.06■■□□□ 1.76
PHGDH-232ENST00000641947 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
PHGDH-232ENST00000641947 KIAA1107Q9UPP5 1409 aa26.04■■□□□ 1.76
PHGDH-232ENST00000641947 PLEKHH2Q8IVE3 1493 aa26.03■■□□□ 1.76
PHGDH-232ENST00000641947 MAST1Q9Y2H9 1570 aa26.02■■□□□ 1.76
PHGDH-232ENST00000641947 CLSPNQ9HAW4 1339 aa26■■□□□ 1.75
PHGDH-232ENST00000641947 EFCAB2Q5VUJ9 269 aa26■■□□□ 1.75
PHGDH-232ENST00000641947 FANCAO15360 1455 aa25.99■■□□□ 1.75
PHGDH-232ENST00000641947 ANKRD30AQ9BXX3 1397 aa25.97■■□□□ 1.75
PHGDH-232ENST00000641947 TRAPPC8Q9Y2L5 1435 aa25.95■■□□□ 1.74
PHGDH-232ENST00000641947 DENND4BO75064 1496 aaPredicted RBP25.93■■□□□ 1.74
PHGDH-232ENST00000641947 MAP3K4Q9Y6R4 1608 aa25.93■■□□□ 1.74
PHGDH-232ENST00000641947 TSPY4P0CV99 314 aa25.92■■□□□ 1.74
PHGDH-232ENST00000641947 TSPY10P0CW01 314 aa25.92■■□□□ 1.74
PHGDH-232ENST00000641947 RSPH4AQ5TD94 716 aa25.92■■□□□ 1.74
PHGDH-232ENST00000641947 PLXNC1O60486 1568 aa25.92■■□□□ 1.74
PHGDH-232ENST00000641947 CD109Q6YHK3 1445 aa25.91■■□□□ 1.74
PHGDH-232ENST00000641947 KIF15Q9NS87 1388 aa25.89■■□□□ 1.74
PHGDH-232ENST00000641947 DIP2BQ9P265 1576 aa25.89■■□□□ 1.73
PHGDH-232ENST00000641947 GLI2P10070 1586 aa25.88■■□□□ 1.73
PHGDH-232ENST00000641947 CFAP74Q9C0B2 1584 aa25.88■■□□□ 1.73
PHGDH-232ENST00000641947 ANKRD50Q9ULJ7 1429 aa25.88■■□□□ 1.73
PHGDH-232ENST00000641947 ADGRL1O94910 1474 aa25.88■■□□□ 1.73
PHGDH-232ENST00000641947 ZFYVE16Q7Z3T8 1539 aa25.85■■□□□ 1.73
PHGDH-232ENST00000641947 INO80Q9ULG1 1556 aaPredicted RBP25.84■■□□□ 1.73
PHGDH-232ENST00000641947 TRIM52Q96A61 297 aa25.83■■□□□ 1.73
PHGDH-232ENST00000641947 SCAPERQ9BY12 1400 aa25.82■■□□□ 1.72
PHGDH-232ENST00000641947 AFAP1Q8N556 730 aa25.81■■□□□ 1.72
PHGDH-232ENST00000641947 PZPP20742 1482 aa25.81■■□□□ 1.72
PHGDH-232ENST00000641947 KIF13AQ9H1H9 1805 aa25.79■■□□□ 1.72
PHGDH-232ENST00000641947 PPRC1Q5VV67 1664 aaKnown RBP25.78■■□□□ 1.72
PHGDH-232ENST00000641947 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
PHGDH-232ENST00000641947 ATP7AQ04656 1500 aa25.77■■□□□ 1.72
PHGDH-232ENST00000641947 MPHOSPH9Q99550 1183 aa25.77■■□□□ 1.72
PHGDH-232ENST00000641947 TSPOAP1O95153 1857 aa25.76■■□□□ 1.71
PHGDH-232ENST00000641947 DUOX2Q9NRD8 1548 aa25.76■■□□□ 1.71
PHGDH-232ENST00000641947 RTEL1-TNFRSF6BF6WH68 1400 aa25.75■■□□□ 1.71
PHGDH-232ENST00000641947 KIDINS220Q9ULH0 1771 aa25.75■■□□□ 1.71
PHGDH-232ENST00000641947 KDM5DQ9BY66 1539 aa25.75■■□□□ 1.71
PHGDH-232ENST00000641947 NEO1Q92859 1461 aa25.74■■□□□ 1.71
PHGDH-232ENST00000641947 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
PHGDH-232ENST00000641947 UNC13BO14795 1591 aa25.74■■□□□ 1.71
PHGDH-232ENST00000641947 KDM5CP41229 1560 aa25.73■■□□□ 1.71
PHGDH-232ENST00000641947 POGZQ7Z3K3 1410 aa25.71■■□□□ 1.71
PHGDH-232ENST00000641947 ACIN1Q9UKV3 1341 aaKnown RBP25.71■■□□□ 1.71
PHGDH-232ENST00000641947 ZNF518AQ6AHZ1 1483 aa25.71■■□□□ 1.71
PHGDH-232ENST00000641947 FAM69CQ0P6D2 419 aa25.7■■□□□ 1.7
PHGDH-232ENST00000641947 RICTORQ6R327 1708 aa25.69■■□□□ 1.7
PHGDH-232ENST00000641947 ERBINQ96RT1 1412 aa25.68■■□□□ 1.7
PHGDH-232ENST00000641947 FOXD1Q16676 465 aa25.68■■□□□ 1.7
PHGDH-232ENST00000641947 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
PHGDH-232ENST00000641947 SLC4A1APQ9BWU0 796 aaKnown RBP25.65■■□□□ 1.7
PHGDH-232ENST00000641947 NUP155O75694 1391 aa25.65■■□□□ 1.7
PHGDH-232ENST00000641947 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
PHGDH-232ENST00000641947 MAGI2Q86UL8 1455 aa25.64■■□□□ 1.7
PHGDH-232ENST00000641947 IQGAP3Q86VI3 1631 aa25.63■■□□□ 1.69
PHGDH-232ENST00000641947 FRMPD1Q5SYB0 1578 aa25.63■■□□□ 1.69
PHGDH-232ENST00000641947 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
PHGDH-232ENST00000641947 ANKRD30BQ9BXX2 1392 aa25.62■■□□□ 1.69
PHGDH-232ENST00000641947 DEPDC5O75140 1603 aa25.61■■□□□ 1.69
PHGDH-232ENST00000641947 ABCA6Q8N139 1617 aa25.6■■□□□ 1.69
PHGDH-232ENST00000641947 MLH3Q9UHC1 1453 aa25.59■■□□□ 1.69
PHGDH-232ENST00000641947 EIF2AK4Q9P2K8 1649 aaKnown RBP25.58■■□□□ 1.69
PHGDH-232ENST00000641947 RAPGEF3O95398 923 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms