RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
CASC19-227ENST00000641411 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
CASC19-227ENST00000641411 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
CASC19-227ENST00000641411 NLRP6P59044 892 aa14.02□□□□□ -0.17
CASC19-227ENST00000641411 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
CASC19-227ENST00000641411 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
CASC19-227ENST00000641411 RIMBP2O15034 1052 aa14□□□□□ -0.17
CASC19-227ENST00000641411 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
CASC19-227ENST00000641411 PKD2Q13563 968 aa13.96□□□□□ -0.17
CASC19-227ENST00000641411 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
CASC19-227ENST00000641411 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
CASC19-227ENST00000641411 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
CASC19-227ENST00000641411 ERBB3P21860 1342 aa13.94□□□□□ -0.18
CASC19-227ENST00000641411 STK25O00506 426 aa13.93□□□□□ -0.18
CASC19-227ENST00000641411 RGL2O15211 777 aa13.89□□□□□ -0.19
CASC19-227ENST00000641411 KIF3CO14782 793 aa13.88□□□□□ -0.19
CASC19-227ENST00000641411 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
CASC19-227ENST00000641411 ZNF687Q8N1G0 1237 aa13.83□□□□□ -0.2
CASC19-227ENST00000641411 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
CASC19-227ENST00000641411 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
CASC19-227ENST00000641411 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
CASC19-227ENST00000641411 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.217e-7■□□□□ 9.8
CASC19-227ENST00000641411 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
CASC19-227ENST00000641411 SLC34A2O95436 690 aa13.73□□□□□ -0.21
CASC19-227ENST00000641411 PPP1R37O75864 691 aa13.69□□□□□ -0.22
CASC19-227ENST00000641411 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
CASC19-227ENST00000641411 RNF166Q96A37 237 aaPredicted RBP13.66□□□□□ -0.22
CASC19-227ENST00000641411 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
CASC19-227ENST00000641411 PTGER2P43116 358 aa13.64□□□□□ -0.23
CASC19-227ENST00000641411 PCDHGA4Q9Y5G9 962 aa13.64□□□□□ -0.23
CASC19-227ENST00000641411 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CASC19-227ENST00000641411 NUDT7P0C024 238 aa13.62□□□□□ -0.23
CASC19-227ENST00000641411 SHROOM4Q9ULL8 1493 aa13.59□□□□□ -0.23
CASC19-227ENST00000641411 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CASC19-227ENST00000641411 LSM11P83369 360 aaKnown RBP eCLIP13.58□□□□□ -0.24
CASC19-227ENST00000641411 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
CASC19-227ENST00000641411 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
CASC19-227ENST00000641411 PBX2P40425 430 aa13.57□□□□□ -0.24
CASC19-227ENST00000641411 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
CASC19-227ENST00000641411 NACADO15069 1562 aa13.55□□□□□ -0.24
CASC19-227ENST00000641411 FOXK1P85037 733 aa13.55□□□□□ -0.24
CASC19-227ENST00000641411 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
CASC19-227ENST00000641411 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
CASC19-227ENST00000641411 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
CASC19-227ENST00000641411 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
CASC19-227ENST00000641411 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CASC19-227ENST00000641411 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
CASC19-227ENST00000641411 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
CASC19-227ENST00000641411 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
CASC19-227ENST00000641411 DSG2Q14126 1118 aa13.45□□□□□ -0.26
CASC19-227ENST00000641411 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
CASC19-227ENST00000641411 ABCC9O60706 1549 aa13.43□□□□□ -0.26
CASC19-227ENST00000641411 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
CASC19-227ENST00000641411 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
CASC19-227ENST00000641411 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
CASC19-227ENST00000641411 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
CASC19-227ENST00000641411 RB1CC1Q8TDY2 1594 aa13.36□□□□□ -0.27
CASC19-227ENST00000641411 TK2O00142 265 aa13.34□□□□□ -0.27
CASC19-227ENST00000641411 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
CASC19-227ENST00000641411 TBC1D12O60347 775 aa13.33□□□□□ -0.28
CASC19-227ENST00000641411 HRO43593 1189 aa13.32□□□□□ -0.28
CASC19-227ENST00000641411 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
CASC19-227ENST00000641411 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
CASC19-227ENST00000641411 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
CASC19-227ENST00000641411 PSEN2P49810 448 aa13.29□□□□□ -0.28
CASC19-227ENST00000641411 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
CASC19-227ENST00000641411 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
CASC19-227ENST00000641411 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
CASC19-227ENST00000641411 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CASC19-227ENST00000641411 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
CASC19-227ENST00000641411 PDE4AP27815 886 aa13.2□□□□□ -0.3
CASC19-227ENST00000641411 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
CASC19-227ENST00000641411 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
CASC19-227ENST00000641411 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
CASC19-227ENST00000641411 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
CASC19-227ENST00000641411 FOSBP53539 338 aa13.17□□□□□ -0.3
CASC19-227ENST00000641411 MFSD10Q14728 455 aa13.16□□□□□ -0.3
CASC19-227ENST00000641411 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
CASC19-227ENST00000641411 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
CASC19-227ENST00000641411 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
CASC19-227ENST00000641411 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
CASC19-227ENST00000641411 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
CASC19-227ENST00000641411 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
CASC19-227ENST00000641411 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
CASC19-227ENST00000641411 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
CASC19-227ENST00000641411 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
CASC19-227ENST00000641411 EVI5O60447 810 aa13.09□□□□□ -0.31
CASC19-227ENST00000641411 BHMG1C9JSJ3 638 aaPredicted RBP13.08□□□□□ -0.32
CASC19-227ENST00000641411 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
CASC19-227ENST00000641411 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
CASC19-227ENST00000641411 PTPREP23469 700 aa13.06□□□□□ -0.32
CASC19-227ENST00000641411 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CASC19-227ENST00000641411 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
CASC19-227ENST00000641411 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
CASC19-227ENST00000641411 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
CASC19-227ENST00000641411 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
CASC19-227ENST00000641411 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
CASC19-227ENST00000641411 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
CASC19-227ENST00000641411 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
CASC19-227ENST00000641411 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms