RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-222ENST00000641321 ERBB3P21860 1342 aa13.79□□□□□ -0.2
CASC19-222ENST00000641321 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
CASC19-222ENST00000641321 NLRP6P59044 892 aa13.77□□□□□ -0.21
CASC19-222ENST00000641321 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
CASC19-222ENST00000641321 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
CASC19-222ENST00000641321 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
CASC19-222ENST00000641321 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
CASC19-222ENST00000641321 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
CASC19-222ENST00000641321 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
CASC19-222ENST00000641321 STK25O00506 426 aa13.66□□□□□ -0.22
CASC19-222ENST00000641321 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
CASC19-222ENST00000641321 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
CASC19-222ENST00000641321 PKD2Q13563 968 aa13.61□□□□□ -0.23
CASC19-222ENST00000641321 KIF3CO14782 793 aa13.6□□□□□ -0.23
CASC19-222ENST00000641321 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
CASC19-222ENST00000641321 RGL2O15211 777 aa13.58□□□□□ -0.24
CASC19-222ENST00000641321 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
CASC19-222ENST00000641321 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
CASC19-222ENST00000641321 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.252e-6■□□□□ 9.6
CASC19-222ENST00000641321 RNF166Q96A37 237 aaPredicted RBP13.5□□□□□ -0.25
CASC19-222ENST00000641321 SLC34A2O95436 690 aa13.49□□□□□ -0.25
CASC19-222ENST00000641321 PTGER2P43116 358 aa13.48□□□□□ -0.25
CASC19-222ENST00000641321 TMC2Q8TDI7 906 aa13.48□□□□□ -0.25
CASC19-222ENST00000641321 MYT1LQ9UL68 1186 aa13.47□□□□□ -0.25
CASC19-222ENST00000641321 PPP1R37O75864 691 aa13.42□□□□□ -0.26
CASC19-222ENST00000641321 NUDT7P0C024 238 aa13.42□□□□□ -0.26
CASC19-222ENST00000641321 PCDHGA4Q9Y5G9 962 aa13.41□□□□□ -0.26
CASC19-222ENST00000641321 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
CASC19-222ENST00000641321 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
CASC19-222ENST00000641321 PBX2P40425 430 aa13.37□□□□□ -0.27
CASC19-222ENST00000641321 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
CASC19-222ENST00000641321 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
CASC19-222ENST00000641321 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
CASC19-222ENST00000641321 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
CASC19-222ENST00000641321 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
CASC19-222ENST00000641321 PTCD2Q8WV60 388 aaKnown RBP13.29□□□□□ -0.28
CASC19-222ENST00000641321 FOXK1P85037 733 aa13.28□□□□□ -0.28
CASC19-222ENST00000641321 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
CASC19-222ENST00000641321 AXIN2Q9Y2T1 843 aa13.26□□□□□ -0.29
CASC19-222ENST00000641321 PLPP6Q8IY26 295 aa13.23□□□□□ -0.29
CASC19-222ENST00000641321 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
CASC19-222ENST00000641321 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
CASC19-222ENST00000641321 TBC1D12O60347 775 aa13.21□□□□□ -0.29
CASC19-222ENST00000641321 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
CASC19-222ENST00000641321 DSG2Q14126 1118 aa13.19□□□□□ -0.3
CASC19-222ENST00000641321 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
CASC19-222ENST00000641321 ADGRD1Q6QNK2 874 aa13.16□□□□□ -0.3
CASC19-222ENST00000641321 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
CASC19-222ENST00000641321 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
CASC19-222ENST00000641321 TK2O00142 265 aa13.14□□□□□ -0.31
CASC19-222ENST00000641321 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
CASC19-222ENST00000641321 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
CASC19-222ENST00000641321 HRO43593 1189 aa13.09□□□□□ -0.31
CASC19-222ENST00000641321 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
CASC19-222ENST00000641321 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
CASC19-222ENST00000641321 ABCC9O60706 1549 aa13.08□□□□□ -0.31
CASC19-222ENST00000641321 PSEN2P49810 448 aa13.08□□□□□ -0.32
CASC19-222ENST00000641321 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
CASC19-222ENST00000641321 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
CASC19-222ENST00000641321 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
CASC19-222ENST00000641321 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
CASC19-222ENST00000641321 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
CASC19-222ENST00000641321 KCNK17Q96T54 332 aa12.99□□□□□ -0.33
CASC19-222ENST00000641321 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
CASC19-222ENST00000641321 PDE4AP27815 886 aa12.97□□□□□ -0.33
CASC19-222ENST00000641321 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
CASC19-222ENST00000641321 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
CASC19-222ENST00000641321 ANO8Q9HCE9 1232 aaPredicted RBP12.95□□□□□ -0.34
CASC19-222ENST00000641321 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
CASC19-222ENST00000641321 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
CASC19-222ENST00000641321 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
CASC19-222ENST00000641321 FOSBP53539 338 aa12.93□□□□□ -0.34
CASC19-222ENST00000641321 KCTD12Q96CX2 325 aaKnown RBP12.93□□□□□ -0.34
CASC19-222ENST00000641321 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
CASC19-222ENST00000641321 PTPREP23469 700 aa12.88□□□□□ -0.35
CASC19-222ENST00000641321 JPH4Q96JJ6 628 aa12.87□□□□□ -0.35
CASC19-222ENST00000641321 LARP6Q9BRS8 491 aaKnown RBP12.86□□□□□ -0.35
CASC19-222ENST00000641321 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-222ENST00000641321 BHMG1C9JSJ3 638 aaPredicted RBP12.85□□□□□ -0.35
CASC19-222ENST00000641321 EVI5O60447 810 aa12.85□□□□□ -0.35
CASC19-222ENST00000641321 MFSD10Q14728 455 aa12.85□□□□□ -0.35
CASC19-222ENST00000641321 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
CASC19-222ENST00000641321 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
CASC19-222ENST00000641321 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
CASC19-222ENST00000641321 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
CASC19-222ENST00000641321 PTPN5P54829 565 aa12.8□□□□□ -0.36
CASC19-222ENST00000641321 ADAM33Q9BZ11 813 aa12.8□□□□□ -0.36
CASC19-222ENST00000641321 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
CASC19-222ENST00000641321 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
CASC19-222ENST00000641321 NBPF3Q9H094 633 aa12.78□□□□□ -0.36
CASC19-222ENST00000641321 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
CASC19-222ENST00000641321 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
CASC19-222ENST00000641321 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
CASC19-222ENST00000641321 WNT2BQ93097 391 aa12.74□□□□□ -0.37
CASC19-222ENST00000641321 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
CASC19-222ENST00000641321 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
CASC19-222ENST00000641321 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
CASC19-222ENST00000641321 PHF14O94880 888 aa12.67□□□□□ -0.38
CASC19-222ENST00000641321 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
CASC19-222ENST00000641321 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms